biol235 Flashcards

1
Q

What are the 2 classes of proteins?

A

Fibrous and globular

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2
Q

What’s a colloid?

A

Solute particles are big enough to scatter light (translucent or opaque)

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3
Q

What are fibrous proteins?

A

Insoluble, polypeptide chains are lone and parallel. Collagen (strenghtens bones, ligaments and tendons), elastin (stretches skin, blood vessels, lung tissue), keratin (forms structure of hair and nails, waterproofs), dystrophin (reinforces parts of muscle cells), fibrin, (forms blood clots) actin and myosin (contractions of muscles, division in cells, and trnsport of substances within cells)

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4
Q

What are globular proteins?

A

Soluble, polypeptide chains are spherical, metabolic functions. Enzymes, antibodies and complement proteins, hemoglobin (trnsports O), lipoproteins (transports lipids and cholesterol), albumins (help regulate blood pH), membrane proteins (transports substances out of cells)

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5
Q

What are nucleic acids?

A

Huge organic molecules that contain C, O, H, N, and P.

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6
Q

What’s a tertiary structure in a protein?

A

3D shape of a polypeptide chain. Unique structure determines how it will function. Folding pattern is determined by disulfide bridges (form between the sulfhydryl groups of 2 monomers of amino acid cysteine) and weak bonds like H bonds, ionic bonds, and hydrophobic interactions.

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7
Q

What are nucleotides?

A

The monomers that repeat in the nucleic acid chain. Each nucleotide has 2 parts: Nitrogenous base, pentose sugar, and phosphate group

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8
Q

What is the nitrogenous base part of a nucleotide?

A

All contain C, H, O and N. Adenosine (A), thymine (T), cytosine (C) and Guanine (G). A and G are large and called purines. T and C are small and called pyrimidines.

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9
Q

What is the pentose sugar part of a nucleotide?

A

A 5 carbon sugar called deoxyribose attaches to each DNA base

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10
Q

What are the 2 phases of cellular respiration?

A

1) Anaerobic phase: Reactions that don’t require O, glucose is partially broken down by a series of catabolic reactions into pyruvic acid. Each glucose molecule converted into pyruvic acid molecule yeilds 2 molecules of ATP. 2) Aerobic phase: in presence of O, glucose is completely broken down into CO2 and water. Generates heat and 30-32 ATP molecules.

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11
Q

Describe the basic structure of the lipid bilayer

A

2 back-to-back layers made up of 3 types of lipid molecules: Phospholipids (75%… contains phosphorus), cholesterol (20%… steriod with attached OH group) and glycolipids (5%… attahched carbohydrate group)

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12
Q

How do phospholipids orient themselves in the lipid bilayer?

A

Their hydrophilic heads face outward… the heads face a watery fluid on either side (cytosol on the inside and EC fluid on the outside). Hydrophobic fatty acid tails in each half of the bilayer point toward one another forming a nonpolar hydrophobic region in the membrane’s interior

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13
Q

What are integral proteins?

A

Extended into or through the lipid bilayer and firmly embedded in it. Most are transmembrane proteins so extend the entire width of the bilayer and portrude into both the cytosol and the EC fluid. Example are glycoproteins (proteins with carbohydrate groups attached to the ends that protrude into the EC fluid. The carbohydrates are oligosaccharides)

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14
Q

What is peripheral proteins?

A

Not as firmly embedded in the membrane. Attached to the polar heads of membrane lipids or integral proteins at the inner or outer surface of the membrane.

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15
Q

What is Glycocalyx?

A

Carbohydrate portions of glycolipids and glycoproteins that form an extensive sugary glyccalyx. Enables cells to recognize one another (ie WBCs ability to detect a foreign glycocalyx).

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16
Q

What’s a main function of glycoproteins and glycolipids?

A

Serve as identity markers. May enable a cell to 1) recognize other cells of the same kind during tissue formation and 2) Recognize and respond to foreign dangerous cells. Eg blood cells must be compatible or RBCs will clump together.

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17
Q

What does membrane fluidity depend on?

A

The number of double bonds in the fatty acid tails of the lipids in the bilayer. Each double bond puts a kink in the fatty acid tail which increases membrane fluidity by preventing lipid molecules from packing together

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18
Q

How does cholesterol’s affect on the lipid bilayer vary based on temperature?

A

Makes lipid bilayer stronger (and less fluidity) at normal temperature and weaker (and more fluidity) at lower temperature

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19
Q

What is selective permeability?

A

The plasma membrane allows some substances t pass more readily than others. Nonpolar molecules (CO2, O2, steriods) are highly permeable, moderately permeable to small uncharged polar molecules (water and urea) and impermeable to large uncharged polar molecules (like glucose). Transmembrane proteins that act as channels and carriers can increase the plasma membrane’s permeability to a variety of selective ions and uncharged polar molecules.

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20
Q

What are endocytosis and exocytosis?

A

They are active processes using the vesicles. In endocytosis, vesicles detach from the plasma membrane while bringing materials into a cell0. In exocytosis vesicles merge with the plasma membrane to release materials from the cell.

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21
Q

What is facilitated diffusion?

A

An integral membrane protein (either a membrane channel or carrier) assists a specific substance across a membrane. Usually solutes that are too polar or highly charged

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22
Q

What are the 2 ways in which water passes through a plasma membrane?

A

1) By moving between neighbouring phospholipids in the lipid bilayer via simple diffusion or 2) by moving through aquaporins (integral membrane proteins that function as water channels)

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23
Q

What is Tonicity?

A

A measre of the solution’s ability to change the volume of cells by altering their water content. An ISOTONIC SOLUTION is any solution in which a cell maintains its normal shape and volume

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24
Q

Define hypotonic solution

A

A solution that has a LOWER concentration of solutes than the cutosol inside the RBCs… water enters faster than it leaves. RBCs swell and may burst (hemolysis)

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25
Q

Define Hypertonic solution

A

A higher concentration of solutes in solution than the cytosol inside the RBCs so cells shrink (crenation)

26
Q

WHat are the 2 sources of cellular energy to drive ACTIVE TRANSPORT?

A

1) energy obtained from the hydrolosys of ATMP (Primary active transport). 2) Energy stored in an ionic concentration gradient (secondary active transport)

27
Q

What’s the sodium-potassium pump?

A

Expels NA+ ions from cells and brings K+ ions in. Maintains low concentration of NA+ ions in cytosol by pumping these ions into the EC fluid against the Na+ concentration gradiant. Pumps K+ into cells against K+ gradient. Maintains low concentration of sodium and high concentration of potassium

28
Q

What are symporters?

A

If the transporters move 2 substances in the same direction across the membrane (secondary active transport)

29
Q

What are the 3 types of endocytosis?

A

receptor-mediated endocytosis, phagocytosis, and bulk-phase endocytosis

30
Q

Endocytosis

A

Steps:

Invagination: The cell membrane folds inward around the material.
Vesicle Formation: The membrane pinches off, forming a vesicle containing the material.
Vesicle Trafficking: The vesicle moves inside the cell to its target location.
Types:

Phagocytosis: “Cell eating” (engulfs large particles)
Pinocytosis: “Cell drinking” (takes in fluids)
Receptor-Mediated Endocytosis: Specific molecules bind to receptors before being internalized.

31
Q

What is bulk-phase endocytosis?

A

Tiny droplets of EC fluid are taken up. No receptor proteins. Solutes dissolved in the EC fluid are brought into the call. Plasma membrane folds inward and forms a vesicle containing a droplet of EC fluid. Vesicle detaches from the plasma membrane and enters the cytosol. Vesicle fuses with a lysosome where enzymes degrade engulfed solutes. Occurs in most cells but especially in absorptive cell like intestines and kidneys.

32
Q

What is the cytoskeleton?

A

Network of protein filaments that extends throughout the cytosol (microfimalements, intermediate filaments, microtubules)

33
Q

What are microfilaments?

A

Thinnest elements of cytoskeleton. Composed of actin and myosin and most prevalent at edge of cell. Helps generate mvement (muscle contractions, cell division and locomotion like cell migration). Provides mechanical support (basic strength and shapes of cells, Anchors cytoskeleton to integral proteins in the plasma membrane. Provides support for cell extensions called microvilli

34
Q

What are intermediate filaments?

A

Helps stabalize the position of organelles like the nucleus and help attach cells to one another

35
Q

What are microtubules?

A

Largest cytoskeletal component. Long unbranched hollow tubes composed mainly of the protein tubulin. Grows outward from the centrosome toward the periphery of the cell. Helps determine cell shape. Helps in the movement of secretory vesicles, chromosomes during cell division and of specialized projections (clilia and flagella).

36
Q

What is the centrosome of the cell?

A

It’s near the nucleus and has 2 parts: the 2 centrioles and the pericentriolar material. The 2 centrioles are cylindrical and composed of 9 clusters of 3 microtubules arranged in a circular pattern. The pericentriolar material has hundreds of ring shaped complexes composed of tubulin. The tubulin is the organizing centres for growth of the mitotic spindle and for microtubule formation in nondividing cells.

37
Q

What are ribosomes in cells?

A

Site of protein synthesis. Synthesize proteins destined for specific organelles, for insertion in the plasma membrane or for export from cell. Divided into large and small subunits. Some are attached to the outer surface of the nuclear membrane and to the ER. Others are free ribosomes an unattachd to other cytoplasmic structures (they synthesize proteins used in the cytosol).

38
Q

What is the endoplasmic reticulum of the cell?

A

Network of membranes in the form of flattened sacs or tubules.

39
Q

What is the smooth ER of the cell?

A

Extends from rough ER to form a network of membrane tubules. No ribosomes on outer surface so does not synthesize proteins. Synthesizes fatty acids and steriods (like estrogen and testosterone). In liver cells the smooth ER helps release glucose to the blood stream and inactivate/detoxify lipid soluble drugs (like alcohol)

40
Q

Where does transcription take place and what serves as a template for it?

A

Nucleus. And the info represented by the base triplets in DNA serve as a template for copying the info into a complementary sequence of codons.

41
Q

What are the 3 types of RNA?

A

1) Messenger RNA (mRNA): Directs synthesis of a protein. 2) Ribosomal RNA (rRNA): Joins with ribosomal proteins to make ribosomes. 3) Transfer RNA (tRNA): Binds to an amino acid and holds it in place on a ribosome until it’s incorporated into a protein during translation.

42
Q

What RNA Polymerase?

A

Catalyzes transcription of RNA. Only 1 of 2 DNA strands serves as template for RNA synthesis.

43
Q

What’s a polyribosome?

A

Several ribosomes attached to the same mRNA… leads to translation of 1 mRNA into several identical proteins at same time

44
Q

What’s the purpose of somatic cell division and what are the 2 types?

A

It is meant to replace dead or injured cells and add new ones during tissue growth. A cell undergoes nuclear division (mitosis) and cytoplasmic division (cytokinesis)

45
Q

What are the 2 main phases of cell division?

A

Interphase (cell not dividing) and mitotic phase (cell dividing)

46
Q

What happens in interphase?

A

Cell replicates its DNA. Produces additioal organelles and cytosolic components in anticipation for cell division. High metabolic activity. Where cell does most of its growing. 3 phases: G1, S and G2

47
Q

What is the G1 phase of interphase?

A

Interruption in DNA duplication (doesn’t happen). Cell metabolically active. Most of its organelles and cytosolic components, replication of centrosomes begins. All cell activities take place. Very short phase in cancer and embryonic cells. In cells that remain in G1 for a long time, it’s called the G0 phase

48
Q

What is the S phase of interphase?

A

Interval between G1 and G2. DNA replicates. About 8 hours. The 2 identical cells formed later during division will therefore have the exact same genetic material

49
Q

What’s the G2 phase of interphase?

A

About 4-6 hours. Cell growth continues. Enzymes and other proteins are synthesized in preparation for division. Replication of centrosomes is completed.

50
Q

What is the mitotic phase?

A

Results in the formation of 2 identical cells. Consists of nuclear division (mitosis) and cytoplasmic divisio (cytokinesis)

51
Q

What is mitosis?

A

Distribution of 2 sets of chromosomes into 2 separate nuclei… exact partitioning of genetic material. Divided into 4 stages: prophase, metaphase, anaphase and telophase

52
Q

What is prophase?

A

Chromatin fibers condense and sorten into chromosomes that are visible under a light microscope. Each chromosome has a pair of identical strands called chromatids (due to S phase). Centromere holds the chromatid pair together. Outside f each centromere is a protein complex called kinetochore. Tubulins in pericentriolar material form the mitotic spindle (microtubules that attach to the kinetochore)… as microtubules lengthen they push the centrosomes to the poles of the cell so the spindle extends from pole to pole. Nucleolus disappears and nuclear envelope breaks down.

53
Q

What is metaphase?

A

Microtubules of the mitotic spindle align the centromeres of the chromatid pairs at the exact centre of the mitotic spindle… this midpoint region is called the METAPHASE PLATE

54
Q

What is anaphase?

A

Centromeres split, separating the 2 members of each chromatid pair which move toward opposite poles of the cell. Chromatids, when separate, are called chromosomes.

55
Q

What is telophase?

A

Finale stage. After chromosomal movement stops. Identical sets of chromosomes uncoil and revert to the thread-like chromatin form. A nuclear envelope forms around each chromatin mass. Nucleoli reappear. Mitotic spindle breaks up.

56
Q

What is cytoplasmic division (Cytokinesis)?

A

Happens after the mitotic phase. Division of a cell’s cytoplasm and organelles into 2 identical cells. Begins in late anaphase with the formation of a cleavage furrow (slight indentation of plasma membrane)… complete in telophase. Actin microfilaments form a contractile ring that pulls the plasma membrane inwards. 2 sets of chromosomes end up in separate cells.

57
Q

What is cyclin-dependent protein kinases (Cdk’s)?

A

Enzymes that transfer a phosphate group from ATP to a protein to activate the protein. Other enzymes can remove the P group to deactivate it. This activation and deactivation of Cdk’s at the appropriate time is crucial for the initiation and regulation of DNA replication, mitosis, ad cytokinesis. Cyclins are the proteins that turn Cdk’s on and off

58
Q

Why are levels of cyclin important?

A

Levels of cyclin in the cell are important for determining the sequence of events in cell division… towards the end of mitosis cyclin levels decline rapidly and mitosis ends

59
Q

Describe prophase 1 of meiosis 1

A

Chromosomes shorten and thicken, the nuclear envelope and nucleoli disappear and mitotic spindles form. Two sister chromatids of each pair of homologous chromosomes pair off (SYNAPSIS). The resulting 4 chromatids form a TETRAD. Second, an exchange between parts of non sister (genetically different) chromatids occurs and is called CROSSING OVER (permits an exchange of genes between chromatids). Crossing over results in genetic recombination

60
Q

What are the 3 differences between epithelial and connective tissue?

A

1) Epithelial cells have many cells tightly packed together so has little to no EC matrix. Connective tissue has a lot of EC matrix that separates cells. 2) Epithelial cells have no blood vessels and connective tissue does. 3) Epithelial cells almost always form surface layers and not covered by other tissue (except the epi lining of blood vessels)

61
Q

What are the 2 layers of the basement membrane?

A

1) Basal lamina: Closer to epithelial cells. Contains proteins like laminin, collagen, glycoproteins, and proteoglycans… adheres to integrins in hemidesmosomes and therefore attaches epi cells to basement membrane. 2) Reticular lamina: Closer to the underlying connective tissue. Contains proteins and collagen produced by connective tissue cells called friboblasts.