Bioenergetics Flashcards
What is metabolism and how is it regulated
- Sum of all chemical reactions that occur in the body, anabolic (synthesis of molecules) and catabolic (breakdown of molecules)
- Regulated by enzymatic activity
What is bioenergetics
- Converting foodstuffs (fats, proteins, carbohydrates) into energy
Describe cell structure
- Cell Membrane: Phospholipid bilayer (lipid soluble substances), fluid mosaic, semipermeable, regulates passage of materials (secretion / absorption), proteins embedded, interacts with environment
- Nucleus: Genetic information (DNA - linear chromosomes), controls shape and activity through protein synthesis, exports genetic information as RNA via the nucleolus / nuclear pores
- Cytoplasm: Gelatinous helix that surrounds the nucleus, membrane bound organelles suspended, chemical reactions, cytosol (semi-fluid matrix)
- Mitochondria: Double walled (inner wall = membranous cristae) partition matrix in-between (DNA / ribosomes), divides independently, site of cellular respiration / metabolism, semi-autonomous
What is energy storage and ATP
- Storage: Energy is stored in chemical bonds within molecules and released when these bonds are broken
- ATP: Adenosine triphosphate, energy currency of cell, energy rich phosphate bonds, made up of three elements (adenine, ribose and phosphate)
- Adenosine diphosphate + inorganic phosphate forms adenosine triphosphate
What are enzymes and two types
- Complex protein structures, catalysts that regulate speed of reactions by lowering the activation energy (Ea), formation of an enzyme substrate complex, remains unchanged (not consumed)
- Kinases: Add phosphate groups to the substrates (creatine kinase, ATPase)
- Dehydrogenases: Remove hydrogen from their substrate (lactate dehydrogenase)
What are factors that affect enzyme activity
- Temperature: Small rise in body temperature increases enzyme activity, exercise results in increased body temperature, large increases in temp can result in decreased activity (exercise)
- pH: Change in pH reduces enzyme activity, each enzyme has an optimal pH range, acid during exercise
What are rate limiting enzymes / modulators of them
- Control of bioenergetics, regulate rate of pathways
- Increase ‘opportunity’ for reaction to progress (increase number of enzymes)
- Switch off enzymes when not required
- Modulators: Levels of ATP and ADP + Pi , high levels of ATP inhibit ATP production, low levels of ATP and high levels of ADP+Pi stimulate ATP production
What is an energy system
- Function to restore ATP (or similar high energy phosphates), energy for can be provided by ATP-PC, glycolysis, oxidative phosphorylation / ETC, beta oxidation / ETC
- No one energy system provides all of the energy for ATP regeneration
- Involves varying contributions for each system
What is ATP hydrolysis and repletion
- Breakdown (catabolic), ATP → ADP + Pi + free energy for biological work, enzyme ATPase breaks the chemical bond of ATP
- Repletion: Occurs very rapidly via ATP-PC (phosphocreatine), lactic acid system and aerobic system, enough for ~ 1sec maximal contraction contained within the cell
What is the phosphocreatine system
- PC, PCr, CP, CrP
- Energy rich phosphate bond, most readily available fuel source for muscle contraction (stored within muscle fibre
- ~5-10 seconds worth of muscle contraction
- ATP hydrolysis catalysed by creatine kinase during exercise
- ATP-PC system, immediate source of ATP, PC + ADP + creatine kinase → ATP + C
- Rapid due to short uncomplicated reaction, doesn’t require O2, easily accessible
- Used in throwing, jumping, sprinting, power lifting, events lasting < 10s
- Regulated by creatine kinase (CK), activated by increase ADP (instantly triggers breakdown of CP to replenish ATP), inhibited by increased ATP
What is glucose vs glycogen and transferals between
- Glucose: C6H12O6, glycogen is a more compact storage form of glucose, blood glucose interacts with muscle glycogen during glycolysis to form pyruvate / lactate
- Glycogenesis: Formation of glycogen from glucose
- Gluconeogenesis: Formation of glycogen from substrates other than glucose
- Glycogenolysis: Breakdown of glycogen to glucose, occurs one glucose at a time
What is glycolysis and what does it produce
- Anaerobic pathway, breakdown of glucose or glycogen to form pyruvate, occurs within the sarcoplasm (outside the mitochondria)
- Ubiquitous, substrate level phosphorylation
- Releases a small amount of energy stored in glucose, much energy still locked up in pyruvate (C-H)
- Preparatory / payoff phase
- Glucose + 2 NAD+ + 2 ADP + 2 Pi → 2 Pyruvate + 2 NADH + 2 H+ + 2 ATP
What are the steps of glycolysis
Preparatory Phase:
- Energy investment, phosphorylation of glucose (6C)
- Glucose-6-phosphate (via hexokinase, use ATP)
- Fructose-6-phosphate
- Fructose-1,6-biphosphate (via phosphofructokinase, use ATP)
- Glyceraldehyde-3-phosphate (3C)
- Used: 2 ATP molecules, 1 glucose and 2 NAD+
Payoff Phase:
- Energy production, glyceraldehyde-3-phosphate (3C) converted to pyruvate (3C)
- Products: 2 NADH (re-oxidised to NAD+), 4 ATP (2 ATP net) and 2 pyruvate
What are electron carrier molecules
- Energy Carriers: Transport H and associated E, to mitochondria for ATP generation (aerobic) or to convert pyruvic acid to lactic acid (anaerobic)
- NAD: Nicotinamide adenine dinucleotide, NAD+ + H → NADH, NADH produced in glycolysis must be converted back to NAD+
- Shuttling H+ into the mitochondria via specific transport system in mitochondrial membrane
- FAD: Flavin adenine dinucleotide, FAD + 2H → FADH2
Define aerobic vs anaerobic
- Anaerobic: Formation of ATP without the use of O2 (ATP-PC and glycolysis), cytoplasm, shorter energy production
- Aerobic: Production of ATP using O2 as the final electron acceptor (TCA, ETC), oxidative, mitochondria, longer energy production (60sec)
What is our immediate source of energy
- The immediate source of energy for muscular contraction is the high-energy phosphate ATP. ATP is degraded via the enzyme ATPase as follows: ATP + ATPase → ADP + Pi + energy
How do muscle cells produce ATP
- Produce ATP by any one or a combination of three metabolic pathways
- (1) ATP-PC system
- (2) glycolysis
- (3) oxidative formation of ATP