Biochemistry Courses - SOS I Flashcards

1
Q

Most cells in the body are in which cell phase?

A

G0 - RESTING CELLS.

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2
Q

Cells in G1 phase:

A
  1. GI epithelial cells.

2. Nucleated RBCs.

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3
Q

DNA replication occurs only in which cell phase?

A

S phase.

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4
Q

Transcription takes place during which phase of the cell cycle?

A

During the ENTIRE INTERPHASE.

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5
Q

Signals for the G1 –> S step:

A

Growth factors –> GH, IGF-1 etc.

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6
Q

Purines:

A
  1. Adenine.

2. Guanine.

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7
Q

Pyrimidines:

A
  1. Cytosine.
  2. Uracil.
  3. Thymine.
    “CUT”
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8
Q

Purines have 1 or 2 rings?

A

2 rings.

Pyrimidines –> 1 ring.

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9
Q

Difference between the adenine and guanine:

A

12 o clock position –> Adenine has NH2.

Guanine has O.

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10
Q

Difference between the pyrimidines:

A

12 o clock –> Cytosine has NH2.
Uracil –> O.
Thymine –> O + a methyl group (CH3) in 2 o clock.

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11
Q

Nucleoside = …?

A

BASE + SUGAR (ribose or deoxyribose).

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12
Q

Nucleotide = …?

A

BASE + SUGAR + P (1, 2 or 3 P, eg AMP, ADP, ATP).

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13
Q

Base –> Nucleoside:

A
Adenine --> Adenosine.
Guanine --> Guanosine.
Cytosine --> Cytidine.
Uracil --> Uridine.
Thymine --> (Deoxythymidine).
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14
Q

Difference between RNA and DNA:

A
  1. Pyrimidine base.

2. Ribose type –> 2’ carbon has OH in RNA ribose - DNA is DEoxyribonucleic acid.

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15
Q

Histones are + or - charged?

A

+ charged, because they have too many ARGININES + LYSINES.

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16
Q

DNA is - charged due to …?

A

PHOSPHATES.

17
Q

10nm chromatin refers to …?

A

NUCLEOSOME.

18
Q

H1 is …?

A

NOT FOUND WITHIN THE NUCLEOSOME - Found out of it.

19
Q

Difference between a 10nm chromatin and a 30nm chromatin?

A

30nm chromatin has H1 (condense nucleosomes together).

20
Q

DNA packaging:

A

DNA double helix –> 10nm chromatin –> 30nm chromatin –> 30nm fibers forms loops attached to scaffolding proteins –> Higher order packaging (heterochromatin).

21
Q

Euchromatin is light or dark-staining:

A

Light –> Euchromatin –> ACTIVE genes.

Dark –> Heterochromatin –> INACTIVE genes - If FEMALE, then the right answer might be a BARR BODY.

22
Q

Euchromatin - When DNA is exposed (light staining spots) …?

A

If there is no option “active genes”, APOPTOSIS may also be correct!
Nucleases can take care of the DNA during apoptosis.

23
Q

DNA pauses and checks:

A

Has 3’ –> 5’ EXONUCLEASE ACTIVITY.

24
Q

RNA polymerase DOES NOT require a …?

A

PRIMER.

25
Q

How many genes do we have?

A

20.000-25.000 genes.

26
Q

Why proofreading during DNA replication?

A

TO AVOID INHERITABLE MUTATIONS.

27
Q

Why do we don’t care about the NON-Proofreading ability of the RNA polymerase?

A
  1. NOT INHERITED.
  2. SHORT half life of protein.
  3. Only happening in 1 cell.
28
Q

Does reverse transcriptase require a primer?

A

YES - Because it is a RNA-dependent DNA DNA DNA polymerase.

ALL DNA POLYMERASES REQUIRE A PRIMER.

29
Q

Why do we need to fragment DNA and not RNA in order to analyze it?

A

Because DNA is MUCH longer than RNA.