Biochemical Test Flashcards
biochemical reactions bacteria use to break down organic compounds and reactions they use to synthesize new bacterial parts from the resulting carbon skeleton.
Bacterial Metabolism
a. Diagnostic schemes analyze each unknown
microorganism for:
- utilization of various substrates as a carbon
source - production of specific end products from
various substrates - production of an acid or alkaline pH in the
test medium
● Breakdown of chemical substrate through the degradative process of catabolism coupled with oxidation-reduction reactions
Energy Production
Bacteria use biochemical pathways to catabolize (breakdown) carbohydrates and produce energy by two mechanisms:
Fermentation
Respiration
● anaerobic process carried out by both obligate and facultative anaerobes
● electron acceptor is an organic compound
Fermentation
● less efficient in energy generation — beginning substrate is not completely reduced
● a mixture of end products (lactate, butyrate, ethanol, and acetoin) accumulates in the medium — identification of anaerobic bacteria
Fermentation
Application of Fermentation
- Voges-Proskauer
- Methyl Red Tests
● efficient energy-generating process
● molecular oxygen is the final electron acceptor
● obligate aerobes and facultative anaerobes
Respiration
NOTE!!!!!!!!!!!!!!!!!
● Certain anaerobes can carry out anaerobic respiration, in which inorganic forms of oxygen, such as ____ and ____, act as the final electron acceptors
nitrate and sulfate
● ability to use acetamide as the sole source of carbon
● produce acylamidase, which deaminates acetamide to release ammonia resulting in an alkaline pH
Acetamide Utilization
Result of Acetamide Ulitization
✓Positive: BLUE COLOR
✓Negative: No color change
QC for Acetamide Utilization
✓Positive: Pseudomonas aeruginosa
✓Negative: Escherichia coli
● ability to use acetate (sodium acetate) as the sole
● source of carbon differentiate Shigella sp. from Escherichia coli
Acetate Utilization
Result for ACETATE UTILIZATION
✓Positive: Medium becomes alkalinized = BLUE
✓Negative: No growth or no indicator change to blue
QC for Acetate Utilization
✓Positive: Escherichia coli
✓Negative: Shigella sonnei
● presumptive identification and differentiation of Streptococcus pyogenes
● distinguish staphylococci species (resistant) from micrococci (susceptible)
Bacitracin (TAXOA) Susceptibility
Result for Bacitracin (TAXOA) Susceptibility
✓Positive: ZOI>10 mm
✓Negative: No zone of inhibition
QC for Bacitracin (TAXOA) Susceptibility
✓Positive: Streptococcus pyogenes
Micrococcus luteus
✓Negative: Streptococcus agalactiae
Staphylococcus aureus
● differentiates ENTEROCOCCI and GROUP D
STREPTOCOCCI from non–group D viridans
streptococci
● growth in the presence of 4% bile and to hydrolyze esculin to esculetin which reacts with Fe3+ to form dark brown to black precipitate
Bile Esculin Test
Result for Bile Esculin Test
✓ Positive: GROWTH and BLACKENING of the
agar slant
✓ Negative: Growth and no blackening of medium
QC for Bile Esculin Test
✓ Positive: Enterococcus faecalis
✓ Negative: Escherichia coli
● differentiates Streptococcus pneumonia
(positive–soluble) from alpha-hemolytic
streptococci (negative–insoluble)
● Bile/Bile salt (sodium desoxycholate) rapidly lyses pneumococcal colonies
● Lysis depends on amidase → autolytic enzyme
Bile Solubility Test
Result for Bile Solubility Test
✓ Positive: Colony disintegrate
✓ Negative: Intact colonies
QC for Bile Solubility Test
✓ Positive: Streptococcus pneumonia
✓ Negative: Enterococcus faecalis
● detect BUTYRATE ESTERASE
● identification of Moraxella (Branhamella) catarrhalis
● bromochlorindolyl butyrate → indoxyl + O2 → Indigo
Butyrate Disk
Result for Butyrate Disk
✓ Positive: Development of a BLUE COLOR
(5-minute incubation)
✓ Negative: No color change
QC for Butyrate Disk
✓ Positive: Moraxella catarrhalis
✓ Negative: Neisseria gonorrhoeae
● differentiate Streptococcus agalactiae (positive)
from other streptococcal species
● CAMP factor acts synergistically with the beta-lysin of S. aureus to cause enhanced lysis of RBC
CHRISTIE, ATKINS, AND MUNCH-PETERSON
(CAMP) TEST
Result for CAMP Test
✓Positive: Arrowhead-shaped zone of
beta-hemolysis
✓Negative: No enhancement of hemolysis
QC for CAMP Test
✓Positive: Streptococcus agalactiae
✓Negative: Streptococcus pyogenes
CAMP Positive Organisms
- Streptococcus agalactiae
- Listeria monocytogenes
- Proprionibacterium acnes
Revere CAMP Positive Organisms
- Clostridium perfringens
- Corynebacterium pseudotuberculosis
- Corynebacterium ulcerans
- Corynebacterium urealyticum
● differentiates catalase-positive MICROCOCCAL and STAPHYLOCOCCAL spp. from catalase-negative
STREPTOCOCCAL spp.
● H2O2 → H2O + O = EFFERVESCENCE
CATALASE TEST
Result for CATALASE TEST
✓ Positive: Copious bubbles are produced
✓ Negative: No or few bubbles are produced
QC for CATALASE TESTCATALASE TEST
✓ Positive: Staphylococcus aureus
✓ Negative: Streptococcus pyogenes
● isolate and purify Pseudomonas aeruginosa from contaminated specimens
● ability of an organism to grow in the presence of cetrimide
Cetrimide Agar
Result for Cetrimide Agar
✓ Positive: Growth, variation in color of colonies
✓ Negative: No growth
QC for Cetrimide Agar
✓ Positive: Pseudomonas aeruginosa
✓ Negative: Escherichia coli
● ability to use SODIUM CITRATE (sole carbon source) and inorganic ammonium salts (sole nitrogen source)
● citrate-permease converts citrate to pyruvate
● ammonium phosphate → ammonia and ammonium hydroxide→ alkaline pH → BROMTHYMOL BLUE indicator from green to blue
Citrate Utilization
Result for Citrate Utilization
✓ Positive: Growth on the medium = BLUE
✓ Negative: Absence of growth
QC for Citrate Utilization
✓ Positive: Enterobacter aerogenes
✓ Negative: Escherichia coli
● differentiate S. aureus (+) from coagulase-negative staphylococci
Coagulase Test
Two forms of Coagulase
- Bound Coagulase→ clumping factor
- Free Coagulase→ extracellular protein enzyme
Result for Coagulase-Slide Test
✓ Positive: Clumping in 10 seconds or less
✓ Negative: No clumping
Result for Coagulase-Tube Test
✓ Positive: Clot of any size
✓ Negative: No clot
QC for Coagulase-Test
✓ Positive: Staphylococcus aureus
✓ Negative: Staphylococcus epidermidis
● differentiate decarboxylase producing
Enterobacteriaceae from other gram-negative
rods
● Amino acid → Amine = alkaline pH →from orange to purple
● pH indicator: BROMCRESOL PURPLE
Decarboxylase Tests (Moeller’s Method)
Result for Decarboxylase Tests (Moeller’s Method)
✓ Positive: Alkaline (PURPLE) color change
✓ Negative: No color change or acid (yellow)
QC for Decarboxylase Tests (Moeller’s Method)
✓ Positive:
▪ Lysine—Klebsiella pneumoniae
▪ Ornithine—Enterobacter aerogenes
▪ Arginine—Enterobacter cloacae
✓ Negative:
▪ Lysine—Enterobacter cloacae
▪ Ornithine—Klebsiella pneumoniae
▪ Arginine—Klebsiella pneumoniae
● distinguish Serratia sp. (+) from Enterobacter sp., Staphylococcus aureus (+) from other species, and Moraxella catarrhalis (+) from Neisseria sp.
● ability to hydrolyze DNA (DNAase)
● DNA–methyl green complex→ from green to colorless zone
DNA Hydrolysis (DNAse Test Agar)
Result for DNA Hydrolysis (DNAse Test Agar)
✓ Positive: COLORLESS around the test organism
✓ Negative: Medium remains green
QC for DNA Hydrolysis (DNAse Test Agar)
✓ Positive: Staphylococcus aureus
✓ Negative: Escherichia coli
● presumptive identification and differentiation of Enterobacteriaceae
● Esculin is hydrolyzed to esculetin, which reacts with Fe3+ and forms a dark brown to black precipitate
Esculin Hydrolysis
Result for Esculin Hydrolysis
✓ Positive: BLACKENED MEDIUM
✓ Negative: No blackening
QC for Esculin Hydrolysis
✓ Positive: Enterococcus faecalis
✓ Negative: Escherichia coli
● ability to ferment carbohydrates
Fermentation Media
differentiate enteric bacteria from
coryneforms
ANDRADE’S FORMULA
Result for ANDRADE’S FORMULA
✓ Positive: Indicator change to PINK
✓ Negative: Growth, but no change in color
QC for ANDRADE’S FORMULA
✓ Positive, with gas: Escherichia coli
✓ Positive, no gas: Shigella flexneri
distinguish enterococci from streptococci
Bromocresol Purple
Result for Bromocresol Purple
✓ Positive: Indicator change to YELLOW
✓ Negative: Growth, but no change in color
QC for Bromocresol Purple
✓ Positive, with gas: Escherichia coli
✓ Negative, no gas: Moraxella osloensis
● presence and arrangement of flagella
Flagellar Stain (Wet Mount Technique)