BIO FINAL EXAM Flashcards
In eukaryotes, there are several different types of RNA polymerase. Which type is
involved in transcription of mRNA for a globin protein?
A) RNA polymerase I
B) RNA polymerase II
C) RNA polymerase III
D) primase
B) RNA polymerase II
Which of the following processes occurs in eukaryotic gene expression?
A) mRNA, tRNA, and rRNA are translated.
B) RNA polymerase binds to the terminator sequence.
C) A cap is added to the 5′ end of the mRNA.
D) RNA polymerase requires tRNA to elongate the molecule
C) A cap is added to the 5′ end of the mRNA.
Which of the following processes correctly describes alternative RNA splicing?
A) It is a mechanism for increasing the rate of translation.
B) It can allow the production of proteins of different sizes and functions from a
single mRNA.
C) It can allow the production of similar proteins from different RNAs.
D) It increases the rate of transcription.
B) It can allow the production of proteins of different sizes and functions from a
single mRNA
In an experimental situation, a student researcher inserts an mRNA molecule into a
eukaryotic cell after she has removed its 5′ cap and poly-A tail. Which of the following
processes would you expect her to find to have occurred?
A) The mRNA is quickly converted into a ribosomal subunit.
B) The cell adds a new poly-A tail to the mRNA.
C) The mRNA attaches to a ribosome and is translated, but more slowly.
D) The molecule is digested by enzymes because it is not protected at the 5′ end
D) The molecule is digested by enzymes because it is not protected at the 5′ end.
How does the primary transcript in the nucleus of a eukaryotic cell compare to the
functional mRNA?
A) the primary transcript is the same size as the mRNA
B) the primary transcript is larger than the mRNA
C) the primary transcript is smaller than the mRNA
D) both the primary transcript and mRNA contain introns
B) the primary transcript is larger than the mRNA
In eukaryotic cells, transcription cannot begin until
A) the two DNA strands have completely separated and exposed the promoter.
B) several transcription factors have bound to the promoter.
C) the 5 caps are removed from the mRNA.
D) the DNA introns are removed from the template.
B) several transcription factors have bound to the promoter.
Why is sequencing an entire genome, such as that of C. elegans, a nematode,
important for genetic research?
A) It allows researchers to use the sequence to build a “better” nematode, which is
resistant to disease.
B) It allows research on a group of organisms we do not usually care much about.
C) A sequence that is found to have a particular function in the nematode is likely to
have a closely related function in vertebrates.
D) A sequence that is found to have no introns in the nematode genome is likely to have
acquired the introns from higher organisms.
A sequence that is found to have a particular function in the nematode is likely to
have a closely related function in vertebrates.
Why are yeast cells frequently used as hosts for cloning?
A) They easily form colonies.
B) They can remove exons from mRNA.
C) They do not have plasmids.
D) They are eukaryotic cells.
D) They are eukaryotic cells.
Pax6 is a gene that is involved in eye formation in many invertebrates, such as
Drosophila. Pax6 is also found in vertebrates. A Pax6 gene from a mouse can be
expressed in a fly and the protein (PAX6) leads to a compound fly eye. This information
suggests which of the following characteristics of this gene?
A) Pax6 genes are identical in nucleotide sequence.
B) PAX6 proteins have identical amino acid sequences.
C) Pax6 is highly conserved and shows shared evolutionary ancestry.
D) PAX6 proteins are different for formation of different kinds of eyes
C) Pax6 is highly conserved and shows shared evolutionary ancestry.
Which of the following characteristics of Taq polymerase make it useful in the PCR
process?
A) It is heat stable and can withstand the heating step of PCR.
B) Only minute amounts are needed for each cycle of PCR.
C) It binds more readily than other polymerases to the primers.
D) It has regions that are complementary to the primers
A) It is heat stable and can withstand the heating step of PCR.
Use the figure to answer the following question.
Which of the following enzymes was used to produce the molecule of DNA in the figure?
A) ligase
B) a restriction enzyme (endonuclease)
C) RNA polymerase
D) DNA polymerase
B) a restriction enzyme (endonuclease)
For which of the following processes can dideoxyribonucleotides be used?
A) to separate different sized DNA fragments
B) to produce cDNA from mRNA
C) to sequence a DNA fragment
D) to visualize DNA expression
C) to sequence a DNA fragment
What information is critical to the success of polymerase chain reaction (PCR) itself?
A) The DNA sequence of the ends of the DNA (i.e., for primer design) to be amplified
must be known.
B) The complete DNA sequence of the DNA to be amplified must be known.
C) The sequence of restriction-enzyme recognition sites in the DNA to be amplified must
be known.
D) The sequence of restriction-enzyme recognition sites in the DNA to be amplified and in
the plasmid where the amplified DNA fragment will be cloned must be known.
A) The DNA sequence of the ends of the DNA (i.e., for primer design) to be amplified
must be known.
Which of the following correctly lists the processes in order for one cycle of
polymerase chain reaction (PCR)?
A) denature DNA; add fresh enzyme; anneal primers; add dNTPs; extend primers
B) anneal primers; denature DNA; extend primers
C) extend primers; anneal primers; denature DNA
D) denature DNA; anneal primers; extend primers
D) denature DNA; anneal primers; extend primers
The final step in a Sanger DNA sequencing reaction is to run the DNA fragments on a
polyacrylamide gel. What purpose does this serve?
A) It adds ddNTP to the end of each DNA fragment.
B) It changes the length of the DNA fragments.
C) It separates DNA fragments based on their charge.
D) It separates DNA fragments generated during the sequencing reaction based on
one-nucleotide differences in their size.
D) It separates DNA fragments generated during the sequencing reaction based on
one-nucleotide differences in their size.
How can a gene that contains introns be made shorter (but remain functional) for
genetic engineering purposes?
A) using a restriction enzyme (endonuclease) to cut the gene into shorter pieces
B) using reverse transcriptase to reconstruct the gene from its mRNA
C) using DNA polymerase to reconstruct the gene from its polypeptide product
D) using DNA ligase to put together fragments of the DNA that code for a particular
polypeptide
B) using reverse transcriptase to reconstruct the gene from its mRNA
Which of the following enzymes is required to make complementary DNA (cDNA) from
RNA?
A) restriction enzymes (endonucleases)
B) helicase
C) DNA ligase
D) reverse transcriptase
D) reverse transcriptase
How have DNA microarrays made a huge impact on genomic studies?
A) They can be used to eliminate the function of any gene in the genome.
B) They can be used to introduce entire genomes into bacterial cells.
C) They allow the expression of many or even all of the genes in the genome to be
compared at once.
D) They allow physical maps of the genome to be assembled in a very short time
They allow the expression of many or even all of the genes in the genome to be
compared at once.
RNAi methodology uses double-stranded pieces of RNA to trigger breakdown of a
specific mRNA or inhibit its translation. For which of the following processes might this
technique be useful?
A) to decrease the production from a harmful mutated gene
B) to destroy an unwanted allele in a homozygous individual
C) to form a knockout organism that will not pass the deleted sequence to its progeny
D) to raise the concentration of a desired protein
A) to decrease the production from a harmful mutated gene
Which of the following statements correctly describes how RNA interference (RNAi)
silences selected genes?
A) Synthetic double-stranded RNA molecules stop transcription from occurring.
B) Synthetic double-stranded RNA molecules stop DNA replication from occurring.
C) Synthetic double-stranded RNA molecules trigger the breakdown of a gene’s
messenger RNA.
D) Synthetic double-stranded RNA molecules stop mitosis from occurring
C) Synthetic double-stranded RNA molecules trigger the breakdown of a gene’s
messenger RNA.
n a comparison of two DNA sequences found in the same location on homologous
chromosomes, one of the homologs carries the sequence 5′-AACTACGA-3′, and the other
homolog carries the sequence
5′-AACTTCGA-3′. Within a population, you discover that each of these sequences is
common. Which of the following statements correctly describes theses sequences?
A) They contain a SNP that may be useful for genetic mapping.
B) They can identify a protein-coding region of a gene.
C) They may cause disease.
D) They may carry out RNA interference
A) They contain a SNP that may be useful for genetic mapping.
Which of the following processes uses labeled probe to visualize the expression of
gene (i.e., mRNA) in whole tissues and organisms?
A) RT-PCR
B) in situ hybridization
C) DNA microarrays
D) RNA interference
B) in situ hybridization
Which of the following statements correctly describes one of the main differences
between embryonic stem cells and adult stem cells?
A) Embryonic stem cells only differentiate into only eggs and sperm, and adult stem cells
differentiate into any type of cell.
B) Embryonic stem cells can give rise to all cell types in the organism, and adult
stem cells cannot.
C) Embryonic stem cells can continue to reproduce for an indefinite period, and adult stem
cells cannot.
D) One aim of using embryonic stem cells is to provide cells for repair of diseased tissue.
B) Embryonic stem cells can give rise to all cell types in the organism, and adult
stem cells cannot.
In 1997, Dolly the sheep was cloned. Which of the following processes was used?
A) replication and dedifferentiation of adult stem cells from sheep bone marrow
B) separation of an early stage sheep blastula into separate cells, one of which was
incubated in a surrogate ewe
C) transfer of an adult cell’s nucleus into an enucleated sheep egg, followed by
incubation in a surrogate ewe
D) isolation of stem cells from a lamb embryo and production of a zygote equivalent
C) transfer of an adult cell’s nucleus into an enucleated sheep egg, followed by
incubation in a surrogate ewe
In animals, what is the difference between reproductive cloning and therapeutic
cloning?
A) Reproductive cloning uses totipotent cells, whereas therapeutic cloning does not.
B) Reproductive cloning uses embryonic stem cells, whereas therapeutic cloning does not.
C) Therapeutic cloning uses nuclei of adult cells transplanted into enucleated unfertilized
eggs.
D) Therapeutic cloning supplies cells for repair of diseased or injured organs
D) Therapeutic cloning supplies cells for repair of diseased or injured organs
In recent times, it has been shown that adult cells can be induced to become
pluripotent stem cells (iPS cells). To make this conversion, what has been done to the
adult cells?
A) A retrovirus is used to introduce four specific master regulatory genes.
B) The adult stem cells must be fused with embryonic cells.
C) Cytoplasm from embryonic cells is injected into the adult cells.
D) The nucleus of an embryonic cell is used to replace the nucleus of an adult cell.
A) A retrovirus is used to introduce four specific master regulatory genes.
Transgenic mice are useful to human researchers because they ________.
A) can be valuable animal models of human disease
B) are essential for mapping human genes
C) are now used in place of bacteria for cloning human genes
D) were instrumental in pinpointing the location of the huntingtin gene
A) can be valuable animal models of human disease
Which of the following information or processes does gene therapy require?
A) the knowledge and availability of the defective gene but not the normal allele
B) the ability to introduce the normal allele (i.e., normal gene) into the patient
C) the ability to express the introduced gene at any time in the tissue site within the patient
D) the ability to introduce a defective allele into a patient
B) the ability to introduce the normal allele (i.e., normal gene) into the patient
Why might using retroviral vectors for gene therapy increase the patient’s risk of
developing cancer?
A) Retroviral vectors may introduce proteins from the virus.
B) Retroviral vectors do not express the genes that were introduced into a patient’s cells.
C) Retroviral vectors do not integrate their recombinant DNA into the patient’s genome.
D) Retroviral vectors integrate recombinant DNA into the genome in ways that may
misregulate the expression of genes at or near the site of integration
D) Retroviral vectors integrate recombinant DNA into the genome in ways that may
misregulate the expression of genes at or near the site of integration
In DNA technology, the term vector can refer to
A) the enzyme that cuts DNA into restriction fragments.
B) the sticky end of a DNA fragment.
C) a SNP marker.
D) a plasmid used to transfer DNA into a living cell.
D) a plasmid used to transfer DNA into a living cell
Which of the following tools of DNA technology is incorrectly paired with its use?
A) electrophoresis—separation of DNA fragments
B) DNA ligase—cutting DNA, creating sticky ends of restriction fragments
C) DNA polymerase—polymerase chain reaction to amplify sections of DNA
D) reverse transcriptase—production of cDNA from mRNA
B) DNA ligase—cutting DNA, creating sticky ends of restriction fragments
paleontologist has recovered a bit of tissue from the 400-year-old preserved skin of
an extinct dodo (a bird). To compare a specific region of the DNA from a sample with DNA
from living birds, which of the following would be most useful for increasing the amount of
dodo DNA available for testing?
A) SNP analysis
B) polymerase chain reaction (PCR)
C) electroporation
D) gel electrophoresis
B) polymerase chain reaction (PCR)
DNA technology has many medical applications. Which of the following is not done
routinely at present?
A) production of hormones for treating diabetes and dwarfism
B) analysis of gene expression for more informed cancer treatments
C) gene editing by the CRISPR-Cas9 system in viable human embryos to correct
genetic diseases
D) prenatal identification of genetic disease alleles
C) gene editing by the CRISPR-Cas9 system in viable human embryos to correct
Which of the following is not true of cDNA produced using human brain tissue as the
starting material?
A) It can be amplified by the polymerase chain reaction.
B) It was produced from pre-mRNA using reverse transcriptase.
C) It can be labeled and used as a probe to detect genes expressed in the brain.
D) It lacks the introns of the pre-mRNA.
B) It was produced from pre-mRNA using reverse transcriptase.
Expression of a cloned eukaryotic gene in a bacterial cell involves many challenges.
The use of mRNA and reverse transcriptase is part of a strategy to solve the problem of
A) post-transcriptional processing.
B) post-translational processing.
C) nucleic acid hybridization.
D) restriction fragment ligation
A) post-transcriptional processing.
Which of the following processes is an early step in the whole-genome shotgun
approach to sequencing?
A) break genomic DNA at random sites
B) map the position of cloned DNA fragments
C) randomly select DNA primers and hybridize these to random positions of chromosomes
in preparation for sequencing
A) break genomic DNA at random sites
Using modern techniques of sequencing by synthesis and the shotgun approach,
sequences are assembled into chromosomes by ________.
A) placing them on previously generated genetic maps
B) cloning them into plasmid vectors
C) computer analysis looking for sequence overlaps
D) cloning them into plasmid vectors, placing them on previously generated genetic maps,
followed by computer analysis looking for sequence overlaps
C) computer analysis looking for sequence overlaps
Which of the following statements defines proteomics?
A) It is the linkage of each gene to a particular protein.
B) It is the study of the full protein set and its properties.
C) It is the totality of the functional possibilities of a single protein.
D) It is the study of how amino acids are ordered in a protein.
B) It is the study of the full protein set and its properties.
Bioinformatics can be used to scan for short sequences that specify known mRNAs,
called ________.
A) expressed sequence tags (ESTs)
B) multigene families
C) proteomes
D) short tandem repeats
A) expressed sequence tags (ESTs)
Which of the following processes correctly describes gene annotation in
bioinformatics?
A) finding transcriptional start and stop sites, RNA splice sites, and ESTs in DNA
sequences
B) assigning names to newly discovered genes
C) describing the functions of noncoding regions of the genome
D) matching the corresponding phenotypes of different species
A) finding transcriptional start and stop sites, RNA splice sites, and ESTs in DNA
Bioinformatics includes ________.
I. using computer programs to align DNA sequences
II. creating recombinant DNA from separate species
III. developing computer-based tools for genome analysis
IV. using mathematical tools to make sense of biological systems
A) I and II
B) II and III
C) II and IV
D) I, III, and IV
D) I, III, and IV
After finding a new medicinal plant, a pharmaceutical company decides to determine if
the plant has genes similar to those of other known medicinal plants. What would
annotation of the genome of this plant allow the company to determine?
A) what proteins are produced by the plant
B) what mRNA transcripts are produced by the plant
C) identify genes and determine their functions
D) identify the location of mRNA within the plant cells
C) identify genes and determine their functions
If the sequence of a cDNA (i.e., complementary DNA or copy DNA) has matches with
DNA sequences in the genome, then this genomic DNA could be described by which of
the following statements?
A) The sequence codes for a protein.
B) The sequence codes for an rRNA.
C) The sequence is part of an intron.
D) The sequence is a regulatory sequence.
A) The sequence codes for a protein.
Which of the following techniques would be most appropriate to test the hypothesis
that humans and chimps differ in the expression of a large set of shared genes?
A) DNA microarray analysis
B) polymerase chain reaction (PCR)
C) DNA sequencing
D) protein-protein interaction assay
A) DNA microarray analysis
What can proteomics reveal that genomics cannot?
A) the number of genes characteristic of a species
B) the patterns of alternative splicing
C) the set of proteins present within a cell or tissue type
D) the movement of transposable elements within the genome
C) the set of proteins present within a cell or tissue type
A sequence database such as GenBank could be used to carry out which of the
following processes?
A) Determine the expression pattern for specific human genes.
B) Construct a tree to determine the evolutionary relationships between various bird
species.
C) Search for genes that have not yet been identified in eukaryotic genomes.
D) Compare patterns of gene expression in cancerous and non-cancerous cells
B) Construct a tree to determine the evolutionary relationships between various bird
species
Current analysis indicates that less than 2% of the human genome codes for proteins.
(True/False).
Answer: True
Which of the following statements correctly describes one of the characteristics of
alternative splicing in vertebrate genomes?
A) Vertebrate genomes can produce more than one polypeptide from a single gene.
B) Vertebrate genomes can produce only one polypeptide from a single gene.
C) Vertebrate genomes are always smaller than other organisms.
D) Alternative splicing leaves introns in vertebrate genes after they are transcribed
A) Vertebrate genomes can produce more than one polypeptide from a single gene.
Which of the following statements correctly describes one characteristic of
retrotransposons?
A) They use an RNA molecule as an intermediate in transposition.
B) They are found only in animal cells.
C) They generally move by a cut-and-paste mechanism.
D) They contribute a significant portion of the genetic variability seen within a population of
gametes
A) They use an RNA molecule as an intermediate in transposition.
How do transposons and retrotransposons differ in how they move around in a
genome?
A) Transposons move by viruses and retrotransposons move by plasmids.
B) Transposons move by means of a DNA intermediate and retrotransposons move
by means of an RNA intermediate.
C) Transposons move by means of a RNA intermediate and retrotransposons move by
means of an DNA intermediate.
D) Transposons move by viruses and retrotransposons move by bacteria
B) Transposons move by means of a DNA intermediate and retrotransposons move
by means of an RNA intermediate.
Fragments of DNA have been extracted from the remnants of extinct woolly
mammoths, amplified, and sequenced. How can these fragments of DNA now be used?
A) to introduce certain mammoth traits into relatives, such as elephants
B) to clone live woolly mammoths
C) to understand the reasons why mammoths went extinct
D) to better understand the evolutionary relationships among members of related
taxa
D) to better understand the evolutionary relationships among members of related
taxa
Bioinformatics includes all of the following except
A) using computer programs to align DNA sequences.
B) using DNA technology to combine DNA from two different sources in a test tube.
C) developing computer-based tools for genome analysis.
D) using mathematical tools to make sense of biological systems
B) using DNA technology to combine DNA from two different sources in a test tube.
Which of the following molecules is a protein produced by a regulatory gene?
A) operon
B) inducer
C) promoter
D) repressor
D) repressor
Which of the following molecules helps to “turn off” genes in a cell?
A) operon
B) inducer
C) promoter
D) corepressor
D) corepressor
Which of the following conditions is most likely to cause the lactose operon to be
transcribed?
A) There is more glucose in the cell than lactose.
B) There is glucose but no lactose in the cell.
C) The cyclic AMP and lactose levels are both high within the cell.
D) The cAMP level is high and the lactose level is low.
C) The cyclic AMP and lactose levels are both high within the cell.
How does the transcription of structural genes in an inducible operon occur?
A) It occurs continuously in the cell.
B) It starts when the pathway’s substrate is present.
C) It starts when the pathway’s product is present.
D) It stops when the pathway’s product is present.
B) It starts when the pathway’s substrate is present.
Under what conditions does the trp repressor block transcription of the trp operon?
A) when the repressor binds to the inducer
B) when the repressor binds to tryptophan
C) when the repressor is not bound to tryptophan
D) when the repressor is not bound to the operator
B) when the repressor binds to tryptophan
How does extracellular glucose inhibit transcription of the lac operon?
A) by strengthening the binding of the repressor to the operator
B) by weakening the binding of the repressor to the operator
C) by inhibiting RNA polymerase from opening the strands of DNA to initiate transcription
D) by reducing the levels of intracellular cAMP
D) by reducing the levels of intracellular cAMP
Imagine that you’ve isolated a yeast mutant that contains histones resistant to
acetylation. What phenotype would you predict for this mutant?
A) The mutant will grow rapidly.
B) The mutant will require galactose for growth.
C) The mutant will show decreased levels of gene expression.
D) The mutant will show increased levels of gene expression.
C) The mutant will show decreased levels of gene expression.
Which of the following statements correctly describes the primary difference between
enhancers and proximal control elements?
A) Enhancers are transcription factors; proximal control elements are DNA sequences.
B) Enhancers improve transcription; proximal control elements inhibit transcription.
C) Enhancers are located considerable distances from the promoter; proximal
control elements are close to the promoter.
D) Enhancers are DNA sequences; proximal control elements are proteins
C) Enhancers are located considerable distances from the promoter; proximal
control elements are close to the promoter.