BIO EXAM 3 Flashcards
- DNA contains the information needed for an organism to develop, survive, and reproduce. To carry out these functions, DNA sequences must be converted into
messages that can be used to produce proteins, which are the complex polymers that do most of the work in our bodies (e.g., enzymes)
- The nucleotides in DNA and RNA have three components: a sugar group, a nitrogenous base, and a phosphate group. Adjacent nucleotides in nucleic acid are joined by a phosphodiester bond. This bond links the phosphate group of one nucleotide to which one of the following components of a neighboring nucleotide a) sugar b) base c) phosphate group
A. Sugar
- Each end of DNA molecule has a number. One end is referred to as 5’ (five prime) and the other end is referred to as 3’ (three prime). The 5’ and 3’ labels refer to
the number on the carbon atom in a deoxyribose sugar molecule to which a phosphate group bonds.
- Antiparallel Definition. In biochemistry, two biopolymers are antiparallel if they run parallel to each other but with opposite directionality (alignments). An example is
the two complementary strands of a DNA double helix, which run in opposite directions alongside each other.
- DNA is composed of four nucleotides while proteins contain
20 distinct amino acids.
- DNA is a nucleic acid composed of nucleotides: a) 5-carbon sugar called deoxyribose b) Phosphate group (PO4) c) Nitrogenous base d) All the above
D. All the above
- Phosphodiester bond. The Bond between adjacent nucleotides. Formed between the phosphate group of one nucleotide and the 3′ —OH of the next nucleotide. The chain of nucleotides has a _____ orientation.
5’ to 3’
- Erwin Chargaff determined that: ALL FACTS
a) always an equal proportion of two-ringed purines (A and G)
b) always an equal proportion of single-ringed pyrimidines (C and T)
c) Amount of adenine = amount of thymine (AT)
d) Amount of cytosine = amount of guanine (CG)
All are facts
- The pattern of base-paring is complementary: ALL FACTS
a) A forms two hydrogen bonds with T
b) G forms three hydrogen bonds with C
All are facts
- Semiconservative model – daughter strands each consist of
one parental strand and one new strand.
In this model, the two strands of DNA unwind from each other, and each act as a template for synthesis of a new, complementary strand. This results in
two DNA molecules with one original strand and one new strand.
DNA polymerases match existing DNA bases with complementary nucleotides and links them, that is build new D N A strands, and a) Synthesize in 5′-to-3′ direction. b) Require an primer of RNA
All the above
Prokaryotic Replication. E. coli used as model system for understanding universal attributes of replication. a) Single circular molecule of D N A b) Replication begins at the origin of replication. c) Proceeds in both directions around the chromosome. d) Replicon – D N A controlled by an origin. e) All the above
E. All the above
- DNA Polymerase III is a type of enzyme that is responsible for forming new copies of DNA, in the form of nucleic acid molecules. Nucleic acids are
polymers, which are large molecules made up of repeating monomers (nucleotides) that are chemically bonded together.
- E. coli has three D N A polymerases. D N A polymerase I (Pol I) Acts on the lagging strand to
remove primers and replace them with DNA.
. DNA polymerase II (Pol II) is involved in
D N A repair processes.
DNA polymerase III (Pol III) is the
Main replication enzyme.
DNA is always synthesized in the 5’-to-3’ direction, meaning that nucleotides are added only to the
3’ end of the growing strand.
In addition to adding nucleotides to a growing D N A strand, some polymerase molecules can
remove nucleotides, acting as nucleases.
Some Polymerase molecules can remove nucleotides, acting as nucleases, a) some polymerases can be endonucleases (cut DNA internally) b) some polymerases can be exonucleases (remove nucleotides from end of DNA)
All the above
Helicases use energy from A T P to
unwind DNA.
Single-strand-binding proteins (SSBs) coat strands to keep them apart. the Unwinding of DNA introduces a strain in the molecule that can lead to
additional twisting of the helix, called supercoiling.
DNA gyrase is
the Topoisomerase involved in DNA replication that relieves torsional strain.
DNA fragments on the lagging strand are called
Okazaki fragments.