Bio/Biochem Questions Flashcards

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1
Q

when does removal of introns occur?

A

DNA –> mRNA

pre mRNA processing

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2
Q

electron carriers in the electron transport chain

A

cytochrome c: 1 electron carrier (cycles between ferrous and ferric state)
Complex I/NADH dehydrogenase complex: 2 electrons to ubiquinone, 4 H+ across the membrane
Complex III: 2 electrons to cytochrome c
Complex IV: 4 electrons from cytochrome c
O2: final electron acceptor, creates 2 molecules of water

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3
Q

what type of primer is most suitable for PCR?

A

suitable primers have a high GC content and have G or C base pairs at the 5’ and 3’ ends

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4
Q

nondisjunction

A

failure of homologous chromosomes to separate during anaphase I of meiosis OR the failure of sister chromosomes to separate during anaphase II of meiosis

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5
Q

why would protein synthesis be inhibited by D-alanine?

A

only L isomers of amino acids are used to form proteins during ribosomal protein synthesis

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6
Q

is growth rate faster under aerobic or anaerobic conditions?

A

aerobic
a much greater amount of ATP is produced to provide energy for reproduction (net 38 ATP vs net 2 ATP per molecule of glucose)

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7
Q

euchromatin vs heterochromatin

A

euchromatin is transcriptionally active while heterochromatin is not

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8
Q

actin filaments are

A

microfilaments

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9
Q

products of fermentation

A

pyruvic acid and glucose 6 phosphate (and other glycolysis intermediates) can still be produced
lactic acid or ethanol
acetyl coA will not be produced in anaerobic conditions

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10
Q

introduction of which amino acid substitution would result in the largest decrease in the entropic penalty associated with a protein folding into its native conformation?

A

Leu to Thr substitution at a surface-exposed site

switching a hydrophobic residue for a hydrophilic residue eliminates the entropic penalty associated with ordered water molecules around hydrophobic groups

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11
Q

germ layers

A

endoderm - epithelial tissues inside the body (digestive and respiratory tracts), bladder, liver, pancreas
mesoderm - bone, muscle, heart and circulatory system, internal sex organs
ectoderm - nervous system, dermis, hair, nails, eyes, ears, mouth, brain

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12
Q

bacterial vs. human cells

A

humans do not have a cell wall
they differ in ribosome units (eukaryotes have larger subunits) - 80S vs 70S in bacteria
bacterial DNA is circular
both use ATP synthase to make ATP

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13
Q

what hormone triggers ovulation?

A

luteinizing hormone

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14
Q

if a mutation in an intron affects the expression of an exon, the intron is likely to contain

A

splice receptor site

alternative splicing leads to changes in exon expressions

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15
Q

mature mRNA is not likely to contain:

A

introns

promoter sequences

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16
Q

transmembrane proteins are likely to contain:

A

signal sequence

facilitates transmembrane protein docking at the endoplasmic reticulum

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17
Q

during which step of cellular respiration is NADH neither oxidized nor reduced?

A

chemiosmosis

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18
Q

where is glomerular filtrate most concentrated?

A

medullary portion of the collecting duct

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19
Q

function of Na+ K+ ATPase during an action potential

A

restores resting potential by moving ions against their concentration gradient
3 sodium ions out of the cell, 2 potassium ions into the cell

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20
Q

resting membrane potential

A

more potassium ions inside than outside, more sodium ions outside than inside
-40 to -90 mV (negative)
to restore resting potential: 3 sodium ions out of the cell, 2 potassium ions into the cell

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21
Q

action potential: depolarization

A

cell becomes more +
positive ions enter the cell, Na+ enters through voltage-gated sodium channels
cell ends up extra positively charged (not neutral)

22
Q

action potential: repolarization

A

cell becomes - again
positive ions leave the cell (Na+ channels close so no new sodium ions can enter, K+ channels open so potassium ions can leave)

23
Q

action potential: hyperpolarization

A

after an action potential, cell becomes extra negatively charged because extra potassium ions leave the cell
sodium-potassium pump reestablishes resting potential

24
Q

what enables a molecule to pass directly through the cell membrane?

A

small molecule
hydrophobic molecule
planar molecule

25
Q

ABC transport protein

A

uses ATP to actively transport antitumor drugs out of the cell

26
Q

lipid raft

A

cholesterol or steroid rich domain

27
Q

the initial filtration step in the glomerulus of the kidney occurs by

A

passive flow due to pressure difference

blood pressure is the initial driver behind glomerular filtration

28
Q

insulin in the liver

A

aids glucose uptake by decreasing the cellular concentration of glucose

29
Q

where are proteins cleaved after translation?

A

endomembrane system

leave the ribosome before being cleaved into active form

30
Q

DNA replication is semiconservative

A

2 copies of the original molecule are made during replication –> each new molecule will contain 1 original strand and 1 newly synthesized strand

31
Q

purines and pyrimidines

A

purines - adenine and guanine, 2 rings

pyrimidines - cystine and thymine/uracil, 1 ring

32
Q

what happens to an action potential if potassium channels are blocked?

A

action potential is prolonged

repolarization requires opening of potassium channels so K+ can exit the cell

33
Q

nuclear localization sequence

A

allows proteins to be translocated to the nucleus
eg an enzyme that activates expression of a gene activates transcription factors for that gene, and transcription factors are found in the nucleus, so that enzyme would likely contain a nuclear localization sequence

34
Q

ubiquitination

A

targets a protein for degradation by a proteasome

posttranslational process

35
Q

Western blot

A

analyzes posttranslational modifications of proteins such as histone acetylation

36
Q

Southern blot

A

used to detect specific DNA sequences in DNA samples
pretranslational unlike Western blot
relies on palindromic restriction sites eg AAGCTT

37
Q

vasopressin regulates the insertion of aquaporins into the apical membranes of the epithelial cells of which renal structure?

A

collecting duct

38
Q

blood from the small intestine is transported first to the

A

liver

39
Q

endosome

A

facilitates internalization of viral particles by endocytosis

40
Q

sperm

A

produced in the seminiferous tubules of the testes

complete maturation and become motile in the epididymis

41
Q

why add a reducing agent to SDS-PAGE?

A

reducing agent removes disulfide bonds

allows monomers to run separately

42
Q

amino acid likely to be phosphorylated

A

serine

43
Q

influx of Na+ across the motor end plate

A

involves ligand-gated ion channel

sodium ion channels bind the ligand acetylcholine to trigger action potential in muscle fibers

44
Q

the Doppler effect

A

person hears a higher frequency before passing the source, then a lower frequency after passing the source
f’>f to f’ higher frequency
moving away from observer –> lower frequency

45
Q

enzyme specific for peptide bonds

A

proteases and hydrolases

46
Q

operon containing two genes in a prokaryotic cell

A

single mRNA transcribed from a single promoter sequence upstream of the first gene in the operon

47
Q

histone acetylation

A

typically promotes transcription by modifying chromatin structure
something that inhibits histone acetylation would inhibit transcription by condensing chromatin structure

48
Q

restriction enzymes recognize

A

palindromic sequences

49
Q

complex II is the same as

A

succinate dehydrogenase

50
Q

imprinted genes

A

expressed in a parent-specific manner (eg passed down maternally or paternally) but are not X or Y linked

51
Q

glomerulus structure

A

prevents the entry of large molecules such as proteins into the filtrate

52
Q

filtrate in the nephron

A

Bowman’s capsule –> proximal tubule –> loop of Henle –> distal tubule –> collecting duct