bio 103 Flashcards

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1
Q

What is the electromagnetic spectrum?

A
The electromagnetic (EM) spectrum consists of all of the radiation which is emitted by stars in the solar system. High frequency wavelengths in the EM spectrum contain more energy than low frequency wavelengths. The EM spectrum includes (from highest energy to lowest energy) gamma rays, X-rays, ultraviolet rays, visible light, infrared waves, microwaves, and radio waves.
Most high energy radiation (gamma, X-rays, some ultraviolet) is stopped from reaching Earth’s surface by the ozone layer. Low energy radiation (infrared, microwave, and radio) are often shielded from Earth by water vapor and carbon dioxide.
Over the years, living organisms have adapted to use the primary source of EM radiation which reaches Earth: visible light. Most animals have eyes which are used to detect visible light. Plants use the energy from visible light to photosynthesize. The various colors of visible light can be remembered using the mnemonic device “ROY G. BIV” (red, orange, yellow, green, blue, indigo, and violet).
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2
Q

What is photosynthesis?

A

Photosynthesis refers to the process by which plants use the energy from visible light, carbon dioxide, and water to produce carbohydrates (glucose) and oxygen.

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3
Q

What is the chemical reaction for photosynthesis?

A

CO2 + H2O + visible light C6H12O6 + O2

carbon dioxide plus water plus visible light produces glucose plus oxygen

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4
Q

What is the glucose from photosynthesis used for? How about oxygen?

A

Glucose is a monomer of polysaccharides (carbohydrates). They are used for food (plants), building materials (wood), fabrics (cotton), paper, fuel, pharmaceuticals, and energy (fossil fuels).
Oxygen is used for breathing and ultimately for cellular respiration. Oxygen also makes up a protective layer of ozone which covers the Earth and protects us from much higher energy electromagnetic radiation.

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5
Q

What are autotrophs?

A

Autotrophs are organisms like algae, green plants, and cyanobacteria which are able to photosynthesize and produce glucose and oxygen. They are sometimes referred to as primary producers and are located at the bottom of the food chain.

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6
Q

How do autotrophs get water and carbon dioxide?

A

Vascular plants get water from their roots. From there it travels up vascular tissue until it reaches leaf veins.
They get carbon dioxide through openings on the underside of leaves called stomata (stoma is singular). Stomata open to let carbon dioxide in and oxygen and water out of a leaf. After entering leaves through stomata, carbon dioxide diffuses into chloroplasts.

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7
Q

What are heterotrophs?

A

Heterotrophs are organisms like humans and other animals which gain their nourishment from eating autotrophs or other animals which eat autotrophs, They are sometimes referred to as consumers.

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8
Q

In what type of organelle does photosynthesis occur? Why?

A

Chloroplasts are the organelles in which photosynthesis occurs because they have pigments which are capable of absorbing visible light and capturing its energy to use in photosynthesis.

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9
Q

Why do green plants look green?

A

Green plants don’t absorb wavelengths of green light; instead, they reflect wavelengths of green light and thus appear green.

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10
Q

Describe the structure and function of a chloroplast.

A

Chloroplasts have double membranes surrounding them. Inside is a fluid-filled interior called the stroma (not to be confused with stoma). Membranes within the stroma form flattened sacs called thylakoids. Thylakoids are stacked in some areas to form grana (granum is singular).
Chlorophyll and other pigments that absorb visible light are a part of the thylakoid membranes. Carbon dioxide is reduced to form glucose in the stroma.

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11
Q

What are the three most important photosynthetic pigments?

A

Chlorophyll a, chlorophyll b, and carotenoids (which play an accessory role) are the most important photosynthetic pigments. Chlorophylls a and b absorb violet, blue, and red light best. Carotenoids absorb violet, blue, and green light best.

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12
Q

What is a spectrophotometer?

A

A spectrophotometer is an instrument which can tell you the wavelengths of light a pigment absorbs.

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13
Q

How does an absorption spectrum differ from an action spectrum?

A

An absorption spectrum shows the visible light wavelengths that various pigments can absorb. An action spectrum shows the visible light used to perform a function (such as photosynthesis).

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14
Q

What are the reactants of photosynthesis? the products?

A

Reactants: carbon dioxide and water
Products: glucose and oxygen

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15
Q

From which reactant does the oxygen from photosynthesis originate?

A

water

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16
Q

Photosynthesis is an oxidation-reduction (redox) reaction. What does this mean?

A

Carbon dioxide is reduced (electrons are added to make glucose) while water is oxidized (electrons are taken away to produce oxygen).

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17
Q

Photosynthesis has two sets of reactions. What are they and how do they differ?

A

Light reactions take place in the thylakoid membranes and involve the oxidation of water to produce oxygen.
Calvin cycle reactions take place in the stroma and involve the reduction of carbon dioxide to produce glucose.

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18
Q

What are the three types of photosynthesis and how do they differ?

A

C3: used by C3 plants (most common plants like maple trees, azaleas, wheat, and Kentucky bluegrass). Mesophyll cells in the leaves contain chloroplasts where both carbon dioxide fixation and other Calvin cycle reactions occur. This type of photosynthesis requires photorespiration (process by which light causes carbon dioxide to be taken up and oxygen to be released by stomata. A drawback is that when the stomata open during the day, water is also lost.
C4: used by C4 plants (sugarcane, corn, Bermuda grass, crab grass). Both mesophyll cells and bundle sheath cells around the leaf veins contain chloroplasts. Carbon dioxide fixation occurs in the mesophyll cells and other Calvin cycle reactions occur in the bundle sheath cells. This type of photosynthesis does not require photorespiration (stomata don’t have to open), so they can be more productive than C3 plants in hot, dry climates.
CAM (crassulacean-acid metabolism): used by flowering succulents living in warm, dry regions (pineapples, cacti, orchids). This type of photosynthesis fixes carbon dioxide into four carbon molecules during the night. It then releases carbon dioxide to the Calvin cycle reactions during the day. This means that stomata only have to open at night, which allows them to conserve water.

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19
Q

Why are the Calvin cycle reactions so important?

A

They produce G3P which can be converted to all sorts of organic molecules. The hydrocarbon skeleton of G3P can be used to synthesize three of the four major macromolecules: carbohydrates, lipids, and proteins.

20
Q

Describe cellular respiration.

A

Cellular respiration is the process by which cells break down glucose and other metabolites to produce energy (ATP). It takes place in the cell cytoplasm and in cellular organelles called mitochondria. Cellular respiration requires oxygen (which means it is an aerobic reaction) and produces carbon dioxide and water as waste products. You can refer to it as the “flip side” of photosynthesis since its products are the reactants of photosynthesis and its reactants are the products of photosynthesis.

21
Q

What is the chemical reaction for cellular respiration?

A

C6H12O6 + O2 H2O + CO2 + energy

glucose plus oxygen produces water plus carbon dioxide plus energy (ATP)

22
Q

Where did the energy captured in the chemical bonds of glucose originally come from?

A

visible light from the EM spectrum (solar energy)

23
Q

Cellular respiration is an oxidation-reduction (redox) reaction. What does this mean?

A

Glucose is oxidized (loses electrons) to become carbon dioxide. Oxygen is reduced (gains electrons) to become water. Two redox coenzymes are involved in this reaction. They are NAD+ (can both give up and accept electrons) and FAD (can replace NAD+ and accept electrons).

24
Q

Is the energy produced during cellular respiration produced quickly or slowly? Why?

A

During cellular respiration, the energy in glucose is released slowly, so ATP is produced gradually. This is better than producing a lot of energy all at once since it provides a stable source of energy for cells and prevents excess energy the cell might not need at the moment from being lost as heat energy.

25
Q

Which is more efficient, cellular respiration or a car? Why?

.

A

Cellular respiration (at 39% efficiency) is more efficient than a car burning gasoline (at 25% efficiency). The total difference between the reactants of cellular respiration (glucose and oxygen) and products (carbon dioxide and water) is 686 kcal. 36-38 ATPs are produced during one cellular respiration reaction. Each ATP phosphate bond has 7.3 kcal. 7.3 kcal x 38 ATP = 263 kcal. 263/686 x 100 = 39% efficiency. This represents the amount of available energy in glucose that is transferred to ATP. The rest of the energy that is not transferred to ATP is lost as heat energy.

26
Q

What are the four phases of cellular respiration? Where does each one take place?

A

(1) glycolysis (outside the mitochondria in the cytoplasm of the cell)
(2) prep reaction (inside mitochondria within its matrix)
(3) citric acid cycle or Kreb’s cycle (inside mitochondria within its matrix)
(4) electron transport chain (inside mitochondria on cristae or membrane infoldings)

27
Q

Describe the structure of a mitochondrion and be able to label its parts on a diagram.

A

Each mitochondrion is surrounded by a double membrane. The inner membrane has an increased surface area because of its many infoldings or cristae. The inside of the mitochondrion is referred to as the matrix and is a gel-like fluid.

28
Q

Why is the mitochondrion often called the powerhouse of the cell?

A

Cellular respiration with its energy production (ATP) takes place in mitochondria. This energy is used for all of the many structures and functions needed by cells.

29
Q

Explain what occurs during the first step of cellular respiration or glycolysis.

A

Outside the mitochondria, glucose is broken down into two molecules of GP3 which requires the energy from 2 ATP molecules. Next GP3 is oxidized (loses electrons) and forms 4 ATP molecules. There is a net energy gain of 2 ATP molecules and pyruvate is produced. Pyruvate enters mitochondria if oxygen is available to continue the second step of cellular respiration. (If oxygen is unavailable, like in muscle cells when you’ve been exercising a lot, fermentation occurs instead. During fermentation, pyruvate is reduced [gains electrons].)

30
Q

Explain what occurs during the second step of cellular respiration or the prep reaction.

A

The prep reaction occurs in the mitochondrial matrix and connects glycolysis to the citric acid cycle. During the prep reaction, pyruvate is oxidized to make a 2-carbon acetyl group which is attached to coenzyme A (NAD+) to form acetyl-CoA. This occurs twice per glucose molecule. No ATP is produced.

31
Q

Explain what occurs during the third step of cellular respiration or the citric acid cycle (Kreb’s cycle).

A

The citric acid cycle occurs in the mitochondrial matrix. Here the 2-carbon acetyl group is added to a 4-carbon molecule to make a 6-carbon molecule called citric acid. Citric acid oxides NADH and FADH2 which carry their added electrons to step four, the electron transport chain. Citric acid is oxidized to form carbon dioxide and two ATP molecules are produced.

32
Q

Explain what occurs during the fourth step of cellular respiration or the electron transport chain.

A

The electron transport chain occurs in mitochondrial cristae. Here carriers (some are cytochrome molecules with a heme group) pass electrons along the chain. Oxygen is the terminal electron acceptor and is reduced to form water. Along the way, 32 or 34 ATP molecules are produced, depending on cell conditions.

33
Q

How many TOTAL ATPs are produced during cellular respiration?

A

36 or 38

34
Q

How does cellular respiration save energy?

A

Throughout its four steps, the coenzymes NAD+ and FAD, as well as ADP, are recycled so new molecules don’t have to be synthesized. This saves energy.

35
Q

What is fermentation?

A

If oxygen is unavailable during glycolysis, pyruvate can be reduced (electrons gained) to produce either (depending on the organism) (1) lactate or (2) alcohol and carbon dioxide.

36
Q

Explain lactic acid fermentation.

A

Lactic acid fermentation is carried out by certain bacteria and fungi to produce lactate (lactic acid). This type of fermentation is used commercially to produce cheese, yogurt, and sauerkraut. It also takes place in oxygen-deprived muscles, leading to soreness caused by a buildup of lactic acid.

37
Q

Explain alcoholic fermentation.

A

Alcoholic fermentation is carried out by yeast to produce carbon dioxide and ethyl alcohol. It is used commercially to produce alcoholic spirits like wine and beer and breads.

38
Q

What are the advantages of fermentation? Disadvantages?

A

Advantage: produces a quick burst of ATP energy for muscular activity
Disadvantages: (1) lactic acid is toxic to cells; (2) when blood can’t remove all lactic acid from muscles, pH increases and your muscles fatigue; (3) your body becomes in oxygen debt because oxygen is needed to restore ATP levels and rid your body of lactic acid; (4) is inefficient.

39
Q

How efficient is fermentation?

A

Two ATP molecules produced from one glucose molecule = 14.6 kcal. Complete glucose breakdown has a potential yield of 686 kcal. 14.6/686 x 100 = only 2.1% efficiency for fermentation.

40
Q

What is metabolism?

A

Metabolism can be described as all of the chemical reactions occurring in your cells which enable it to carry on life processes.

41
Q

Metabolism is composed of catabolic reactions and anabolic reactions. How do they differ?

A

During catabolism, molecules are broken down and energy is released.
During anabolism, molecules are synthesized and energy is used.

42
Q

What are some examples of catabolism?

A

Examples of catabolic reactions include (1) glucose broken down during cellular respiration; (2) fats breaking down into their monomer units (glycerol and three fatty acids); (3) proteins breaking down into their monomer units (amino acids).

43
Q

What happens to the amino groups from amino acids that are formed during protein catabolism?

A

They become ammonia and are ultimately excreted from the body as urea in the urine.

44
Q

What are some examples of anabolism?

A

The ATP produced during cellular respiration is used to synthesize molecules during anabolic reactions. Examples of anabolic reactions include (1) carbohydrates being synthesized from fats; and (2) some metabolites that can be converted to amino acids

45
Q

What is meant by the term “essential” amino acid?

A

There are a total of 20 amino acids that the body uses to produce proteins. Humans can only make 12 of the 20 while plants can make all 20. The 8 amino acids that the human body can’t produce are called essential amino acids because it is essential that we get them through our diet.