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Gene
basic physical and functional unit of heredity located on chromosomes consisting of specific DNA sequences.
Allele
different form of a gene.can be dominant or recessive
chromosomes
descrete physical entities that carry genes.Each gene has a locus on a chromosome
3 domains of life
eukaryotes ,bacteria and archaea-(thermophiles,halophiles and methanogens
Central dogma of Molecular biology
-DNA molecules serve as templates for complementary DNA strands during replication or complementary RNA during transcription. RNA molecules serve as templates for ordering amino acids by ribosomes during translation.
Functional genomics
study of expression of large number of genes
Transcriptomics
study of transcriptomes
Proteomics
study of proteomes
bacteriophages
viruses that infect bacteria
DNA replication system
Template:DS DNA Substrate:dNTP Primer:short RNA fragment with free 3’-OH end Enzyme:DNa dependent dna polymerase
characteristics of repliction
semi-continous Semi-conservative Bidirectional High fidelity
direction of replication
5’-3’
leading strand
daughter strand synthesized from the 5’-3’ direction.
okazaki fragment
daughter strands synthesized from the 3’ end to 5’ end .Called lagging strand.
all DNa polymerases possess
5’-3’ polymerizing exonuclease
DNA pol 1
proofreading and filling the gaps and repairing DNA damage
structure of DNA pol 3
it is the true enzyme for elongation. alpha-has 5’-3’ polymerizing activity epsilon-has 3’-5’ exonuclease activity-ensures replication fidelity. theta-maintains heterodimer structure.
5’-3’ exonuclease activity
cut primer or excise mutated segment.
3’-5” exonuclease activity
excise mismatched nucleotides.
Transcription
Initiation elongation termination
eukaryotic replication
requires replication factors. for termination a telomere is needed which is rich in T and G
point mutation
single nucleotide alteration. -transition-alteration btwn purine and purine -transversion-base mutation between pyrimidine and purine
DNA repairing
light repairing using UV Excision repairing
Excision repairing
uses number of enzymes ; UvrA and UvrB- Recognize and bind the damaged region of DNA. UvrC-excises the damaged segmwnt DNA -pol 1 -synthesize DNA to fill the gap ligase -seals the nick