Bacteriology Flashcards
Gram-negative coccobacillus
non-motile
Acinetobacter spp.
Describe growth of Actinomadura madurae on quad plate containing casein, xanthine, tyrosine, and starch.
Growth on casein and starch, maybe tyrosine
Swelling of the neck beneath the left jaw with enlargement of cervical lymph nodes
GS of purulent material revealed non-acid fast branching GPR
Actinomyces israelii
Classic “Lumpy jaw” case
Beaded, branching anaerobic GPR, non-acid fast
Slow growing
Associated with head and neck abscesses
Actinomyces spp
In a urine culture, a small/pinpoint alpha-hemolytic, weakly pyrase pos GPCL
Sometimes see tetrads
Aerococcus urinae
Gastroenteritis
Oxidase positive GNR
Hydolyzes esculin
Aeromonas spp.
(or plesiomonas)
Anaerobic GNC
Acidaminococcus
Megasphaera
Veillonella
Anaerobic GPC
Peptostreptococcus
Finegoldia
Peptococcus (former peptostrep)
Peptoniphilus
Parvimonas
Anaerococcus
Pharyngitis in 10-30 year old with a rash
Slow growing, small, indistinct zone of β-hemolysis
GPR that may show rudimentary branching
Catalase-negative, urease negative
Shows CAMP-inhibition
Arcanobacterium haemolyticum
Penicillin-resistant (why you need to distinguish from Strep)
Non-hemolytic medusa head colony of the consistency of beaten egg whites
boxcar GPR
non-motile
FUCKING ANTHRAX. BAG THAT SHIT
Demonstrating either hemolysis or motility will rule it out
What are the forms of anthrax possible
Cutaneous, Inhalational (die), Gastrointestinal, Injection
Patient presents with acute food poisoning
Beta-hemolytic GPR in chains, some spores, catalase pos
Bacillus cereus
Can also cause serious eye infections after traumatic inoculation
Small anaerobic GNR resistant to vancomycin, colistin, kanamycin and bile
Bacterioides fragilis group
Only bacillus spp that cannot hydrolize lecithinase
B. subtilis
Grows on KV agar but no fluorescence
Produces black colonies on BBE
Resistant to penicillin
B. fragilis
GS with dog bone appearance
Bifidobacterium
Normal mouth and GI bug. Rarely causes disease.
Light pink colonies on chocolate
Motile, oxidase pos, non-fermenter
Oxidative utilization of maltose only
Rapid urease production and nitrate reduction
Bordatella bronchiseptica
GNCB produces small grey colonies surrounded by a zone of hemolysis on potato-blood-glycerol agar. Will grow on CA, not on BA.
Bordatella pertussis
Causative agent of Lyme Disease
- Radiating rash (Erythema migrans)
- Flu-like symptoms
- Arthritis symptoms following bite
Diagnosed by rash and history of tick bite or serology
- ELISA followed by Western to confirm
Borrelia burgdorferi
Diurnal fever in midwest patient + fatigue
Pos blood @ 9 days on choc
Brucella abortis
Brucella spp. GS
Small GNCB that appear gram positive due to retention of CV
Respiratory disease in CF patients
GNR, NLF grown on media with polymixin B and ticarcillin
drastically alters patient care and affects ability to receive lung transplant
Burkholderia cepacia
Cause of glanders- aggressive pulmonary disease is most common presentation, inhalation or ingestion. Overwhelming septicemia, draining abscesses.
Burkholderia mallei
Cause of meliodosis
Burkholderia pseudomallei
The presence of clue cells with gram variable coccobacilli is diagnostic of…
Bacterial vaginosis
Overgrowth of vaginal flora, including Mobiluncus, Prevotella, genital mycoplasmas, and Gardnerella vaginalis
C-rective protein is elevated in what circumstances?
Pediatric bacterial infections
Test to distinguish C. jejuni from C. coli
Hippurate hydrolysis
(C. jejuni is positive)
Gram stain: curved, S-shaped, or “gull-wing” gram negative rods
Media + Colony Morph
- Selective media, elevated incubation temperature (42oC), and proper atmospheric conditions required for isolation
- Colonies are flat, gray, irregular, and may be either dry or moist with glistening edges
Metabolism
- Microaerophilic (require decreased O2)
- Capnophilic (require increased CO2)
- Nonfermentative and nonoxidative in metabolism
- Oxidase positive
Campylobacter spp
Colony recovered after growth at 42oC was indoxyl acetate pos, as evidenced by a green spot on the indoxyl acetate disk.
Campylobacter upsaliensis
Capnophilic
Colony morphology –> gliding motility
Gram stain –> thin and fusiform (pointed ends)
Normal inhabitants of oral cavities of mammals
Capnocytophaga
GS of pictured colonies produce “rosette-like clusters”
Cardiobacterium hominis
50% males symptomatic -> thin discharge, dysuria, epididymitis
25 - 45% infected females have urethritis
- Mucopurulent discharge containing PMNs
- Cervix: friable, red, edematous
- Ectopy increases risk of endocervicitis
Chlamydia trachomatis
Non-fermenter that can produce indole
Chryseobacterium
Aerotolerant Clostridium include…
C. tertium, C. histolyticum
Flaccid paralysis after consuming improperly canned food
Anaerobic GPR
Clostridium botulinum
Severe watery diarrhea
Anaerobic GPR
Smells like elephant dung
C difficile
Just PCR it, for god’s sake
Lecithinase-producing Clostridia
C. perfringens, C. baratii, C. sordelli, C. novyi
Lipase producing Clostridium species
C. botulinum, C. sporogenes, C. novyi A
Anaerobic GPR, no spores seen in culture
Double zone of B-hemolysis on BA
Lecithinase pos
Clostridium perfringens
Can have sub-terminal spores
Causes gas gangrene or food poisoning
The enxyme producing the outer zone of the double-zone hemolysis of C perfingens is…
Lecethinase
Describe GS appearance and fermentation patterns of Clostridium septicum.
Produces “drum stick” shaped spores
Ferments maltose and lactose, but rarely sucrose
Respiratory sample from patient with pseudomembrane
Black colonies on Cyteine-Tellurite
Palisading GPR, Catalase pos, non-motile
Corynebacterium diphtheriae
Confirm toxin production with Guinea pig lethality or Elek test
Small dry colonies
Pallisading club shaped GPR
Catalase pos, non-motile
Corynebacterium spp.
“Diptheroid”
UTI patient
Tiny colonies, pallisading GPR
Catalase pos, urease pos
Corynebacterium urealyticum
If CSF samples CANNOT be plated within an hour, where should they be stored
Room temp
Freezing or refrigerating will kill meningococcus
Urine culture LF that is Beta-hemolytic
What do we think and what’s left to prove it?
Show indole positive and call it E. coli. Done
Urine culture LF that is not beta-hemolytic
Indole positive and pyrase negative(it’ll actually be blue) -> E coli (NFW)
Indole pos but pyrase pos -> probably Kleb oxytoca (confirm with MS)
Most common causes of bacterial ear infections
Strep pneumoniae = 40-50%
Non-encapsulated H. influenzae = 25-30%
Moraxella catarrhalis = 10-15%
S. pyogenes = 2%
H2S producing Enterobacteriacea
S.P.A.C.E.
Salmonella
Proteus
Arizonieae (or something)
Citrobacter
Edwardsiella
Strong lactose fermenting Enterobacteriacea
Citrobacter, E. coli, Enterobacter, Klebsiella (CEEK)
Enteric organisms that possess the enzyme urease (can hydrolyze urea, releasing ammonia)
Klebsiella and Proteus
Species of Enterococcus with stronger alpha hemolysis at 24 hours and is MUCH more likely to be VRE
E. faecium
Species of enterococcus with vanC, low level vancR
Enterococcus galinarum
Motile enterococcus spp.
Galinarum and casseliflavus
Med grey colony with slight alpha underneath the colony
Catalase neg, PYR pos
Growth in 6.5% NaCl and bile-esculin pos
Enterococcus spp.
Pyrase reaction of VRE is often stronger or weaker than vancS Enterococcus
Weaker
Appearance of VRE on surveillance culture plates
Dark pink-purple or blue
Motility deep looks like a pipe cleaner or test tube brush
Erysipelothrix rhusiopathiae
wound infection
Thin GPR on GS, may branch or form long filaments
non-hemolytic to slightly alpha-hemolytic
H2S positive in TSI
Catalase negative
Non-motile
Facultative anaerobe
Erysipelothrix rhusopathiae
Generally vancomycin-resistant
LF on Mac, A/A + gas, indole pos, motiliy pos, pyrase neg
Escherichia coli
10% can be NLF
large anaerobic GPC
Finegoldia magnus
Extraction of the inoculated and incubated tryptophan broth with xylene, THEN using Ehrlich’s reagent is necessary for detection of indole from…
Flavobacterium indologenes
Production of low amts of indole require extraction first
cutaneous or inhalational routes. RABBITS.
BSL 3 required. CDC Category A Select Biological Agent
Francisella tularensis
Francisella tularensis gs
Very tiny, pale-staining GNCB, often difficult to see individual cells
Long anaerobic GNR
Resistant to vancomycin and colistin
Sensitive to Kanamycin
Variable bile resistance
Chartreuse Fluorescence under UV
Fusobacterium
Bile sensitivity can help distinguish species
Causative agent of Lemierre’s syndrome in young adults
Presents as pharyngitis –> abscess –> sepsis –> death
Fusobacterium necrophorum
Fried egg colony of thin GNR
Fusobacterium necrophorum
Species of GNR that has the classic pointy ends
Fusobacterium nucleatum
MS will not distinguish F naviform and F nucleatum but only nucleatum is pointy
Bacterial vaginosis
GS: gram variable coccobacilli on “Clue Cells”
Catalase neg, non-motile
Gardnerella vaginalis
Beta hemolytic on human or rabbit blood. But NOT on sheep blood agar
Associated infection of Cardiobacterium hominis
Culture negative endocarditis
Associated infection of Eikenella corrodens
Clenched fist infection
Skin popping cellulitis
HACEK Group
Haemophilus spp.
Aggregatibacter actinomycetomcomitans, formerly Actinobacillus actinomycetemcomitans
Cardiobacterium hominis (more rare)
Eikenella corrodens (normal mouth with agar pits –> big in human bites)
Kingella spp
HACEK Group Characteristics
Capnophilic – prefer increased CO2
Slow or poor growers (day two appearance)
Predilection for damaged heart valves
Normal biota of the oral cavity
Associated infection of Kingella kingae
Juvenile osteomyelitis
Associated infection of Actinobacillus actinomycetemcomitans
Localized juvenile periodontitis
tan flat colonies that grow only on CHOC
Haemophilus
Causative agent of Brazilian purpuric fever, an acute febrile disease accompanied by abdominal pain and vomiting and the evolution of a petechial or purpuric rash
Haemophilus aegyptius
*also causes pink eye
Haemophilus spp. that causes genital ulcers
Haemophilus ducreyi
Growth on CA only
Pleomorphic – very small gram-negative coccobacilli to long filamentous rods
Non-motile
Facultative anaerobe
Ferment carbohydrates, generally oxidase positive, catalase positive, and reduce nitrates
Haemophilus spp.
Test for beta-lactamase activity to assess ampicillin and amoxicillin efficacy.
Differentiate H. influenzae and H. parainfluenzae
XV requirements.
If there is only growth around XV disc or between X and V strips, H. influenzae
If there is growth around V, H. parainfluenzae
Gram stain: small, curved, plump bacilli
Microaerophilic (10% CO2, 5% O2, 85% N2)
Temp: 35-37oC
High humidity also favors growth
Most isolates grow within 3 to 5 days
Non-selective blood agar as translucent, gray colonies
Identification: Catalase, urease, and oxidase positive
Helicobacter pylori
LF on Mac, A/A, indole pos, non-motile, pyrase pos
Klebsiella oxytoca
MS cannot distinguish Klebsiella oxytoca and…
Routella
LF on Mac, A/A, indole neg, non-motile, pyrase pos
Klebsiella pneumoniae