Bacterial cell structure and function Flashcards

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1
Q

Outline the key features of bacteria

A
  • Prokaryotes (no nucleus)
  • Typically unicellular (in organisation)
  • Diverse metabolism (heterotrophs/photoautotrophs, aerobes/anaerobes)
  • Typically have a cell size of around 1-2um
  • No membrane-bound organelles (in eukaryotic cells, organelles often surrounded by a membrane similar to the cell membrane)
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2
Q

Outline features of spherical bacterial cells

A
  • Cocci (plural), coccus (singular) = from Greek (‘berry’)
  • May aggregate into: chains (streptococci), clumps (staphylococci), or pairs (diplococci)
  • They can form chains
  • An example would be streptococcus pneumoniae, responsible for pneumonia, common most to the elderly
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3
Q

Why do spherical cells arrange in different shapes and sizes?

A
  • They may have different division points
  • You can have more than one plane of division (can be three, equally divided)
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4
Q

Outline features of rod bacterial cells

A
  • Bacilli (plural), bacillus (singular) = from Latin ‘(stick’)
  • Hence, the bacillus genus (such as bacillus anthracis (causing anthrax)
  • But many other rods exist, so it is termed rod (NOT bacillus)
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5
Q

What is the capsule/mucilage layer?

A
  • A layer surrounding the cell wall and protects the bacterial cell
  • Also known as Glycocalyx
  • Not essential for cell viability
  • Outside of the cell wall
  • When well defined, it is a capsule
  • When less defined, it is a slime layer
  • The structure is usually a single polysaccharide (the type of which can help to identify the bacteria’s species/strain)
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6
Q

What are the functions of a capsule/mucilage layer?

A
  • Adherence = (capsule is sticky) ‘biofilms’
  • Protection = against water loss
  • Protection = against phagocytes in pathogenic bacteria
  • Protection = against chemicals (e.g., disinfectants)
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7
Q

Outline the key features of a bacterial cell wall

A
  • Has a major component of peptidoglycan, or murein
  • It is a complex polymer made of carbohydrates and amino acids
  • Has long (s)glycan chains with repeating subunits: (N-acetylglucosamine, N-acetylmuramic acids)
  • Is crosslinked by short peptide chains
  • The peptidoglycan monomers are synthesised in the cytosol of the bacterial, where they attach to a membrane carrier molecule called bactoprenol
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8
Q

What is the function of bactoprenol?

A
  • They transport the peptidoglycan monomers across the cytoplasmic membrane and work together with other enzymes to insert the monomers into existing peptidoglycan, enabling bacterial growth after the binary fission
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9
Q

Outline the properties of peptidoglycan

A
  • A unique polymer
  • Forms a single molecule-surrounding cell
  • Very strong, but permeable
  • Protects the cell from bursting due to turgor and maintains cell shape
  • Two major types of cell wall = gram positive and gram negative (two dyes used, only one retained by bacteria - due to major cell wall differences, can be told apart)
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10
Q

How do you stain gram-negative bacteria?

A
  1. Crystal violet = primary stain
  2. Fixing of the dye - use of iodine (iodine complex prevents easy removal of dye)
  3. A decolourizer solvent (ethanol) used to remove the dye
  4. All bacteria will take up the crystal violet dye, but…
  5. In gram-positive microorganisms (with a higher peptidoglycan content), the alcohol will dehydrate the cell walls, with the closure of pores, preventing any diffusion of the violet-iodine complex - so cells will remain purple-blue
  6. In gram-negative microorganisms (with a higher lipid content), the solvent will dissolve the lipid bilayer and cells will loose the primary stains

The length of decolourisation is critical as prolonged exposure can remove ALL the stains from both cell types

  1. Use of counterstain (safranin) in order to give the decolourized gram-negative bacteria a pink colour, allowing for easier identification
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11
Q

Outline the bacterial envelope (wall plus membranes) in gram-positive bacteria

A
  • A relatively thick cell wall (>20nm)
  • High internal osmotic pressure (turgid)
  • High peptidoglycan content (>50%)
  • Wall contains other polymers (teichoic acids)
  • Typically, sensitive to lysozyme and penicillin
  • No further layers outside the cell wall
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12
Q

What roles do surface polymers, such as teichoic acids, provide?

A
  • Cell shape
  • Cell determination
  • Regulation of cell division
  • Pathogenesis
  • Antibiotic resistance
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13
Q

Outline the bacterial envelope (wall plus membranes) in gram-negative bacteria

A
  • Relatively thin cell wall (<10nm)
  • Low internal osmotic pressure
  • Low peptidoglycan content (<20%)
  • No teichoic acids
  • A further membrane, outside of the peptidoglycan wall (outer membrane)
  • Mostly resistant to lysozyme and penicillin
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14
Q

Name and outline the main major component of the outer membrane in gram-negative bacteria

A

Lipopolysaccharide:
- Localized in the outer layer of the membrane
- In non-capsulated strains, it is exposed on the cell surface
- Intact bacterial lipopolysaccharides are macromolecules of molecular mass 10-20 kDa (made up of three structural components)
- O-antigen structure is variable and repeats

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15
Q

What is a porin?

A
  • beta-barrel structure
  • Sometimes arranged as trimers
  • Central pore allows passage of small molecules
  • Some are specific for particular molecules (e.g., maltoporin for maltodextrins)
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16
Q

State four types of flagella

A
  1. A-monotrichous (one on one side)
  2. B-Lophotrichous (multiple on one side)
  3. C-Amphitrichous (one/multiple on both sides)
  4. D-Peritrichous (many along all sides)
17
Q

Outline the structure of flagellum

A
  • Plural = flagella
  • Visible in the electron microscope
  • > 1um long and 15nm diameter
  • Three main parts = basal body (‘motor’), hook, and spiral microfilament (rigid helix)
  • Works by rotation at basal body (rotor principle)
18
Q

Outline the function of flagellum

A
  • Motility (swimming movement)
  • Present in motile bacteria
  • Allow chemotaxis (movement to or from chemical signals)
  • Number and position can help in identification
  • Motor = driven via proton motive force (PMF)
19
Q

Outline the structure of fimbriae/pili

A
  • Singular = fimbria/pilus
  • Protein microfilaments (many per cell)
  • <1 nm long and <10 nm in diameter
  • Thinner and shorter than flagella
  • Composed of a single protein
  • No complex basal structure
  • Project into surrounding medium
20
Q

Outline the function of fimbriae/pili

A
  • Specific attachment
  • Important in pathogens (adherence to host cells)
  • Bind to particular sugar sub-units on host surface
  • Various types of pili and gene clusters in a single bacterium (e.g., SpaA = adhesion to pharyngeal epithelial cells, SpaD + SpaH = interaction with laryngeal and lung epithelial cells)
21
Q

Outline the structure of F-pilus

A
  • Hollow protein microtubule
  • 25nm diameter and around 1um long
  • Central pore = 2.5nm diameter
  • Single protein
  • No complex basal body
22
Q

Outline the function of F-pilus

A
  • Gene (DNA) transfer between donor and recipient bacterium during conjugation
  • DNA may pass through central ‘pore’
  • The conjugation pilus or F-pilus (also called sex pilus) have receptors to recognize recipient cells, to receive the donor’s genetic material
  • They allow for the exchange of genetic material by forming “mating pairs”
23
Q

State the features of ribosomes

A
  • Particulate organelles (25nm) within the cell
  • Function = protein synthesis in ALL cellular organisms
  • Ribosomes are made of two subunits, one large and one small
  • Composed of 70% rRNA and 30% protein
  • The prokaryotic 70S ribosome has a small 30S and a large 50S subunit
24
Q

Outline bacterial ribosomes

A
  • The ribosome is 70S (S for Svedberg, a size measurement)
  • The individual subunits are 50S (large) and 30S (small)
  • Subunits** join ONLY during protein synthesis**
  • The 30S subunit consists of one 16S molecule of rRNA and about 21 proteins, and the 50S subunit consists of two rRNAs (5S and 23S) and 31 proteins
25
Q

Outline genomes

A
  • The entire genetic information in a cell or organism
  • No nuclear membrane, but bacteria still contain nucleic acid (DNA) found in the nucleoid region
  • Many have a singular circular chromosome (can have multiple/linear chromosome)
  • Chromosomes carry ESSENTIAL genetic information
  • Circular chromosomes are a CLOSED LOOP of DNA
  • Bacterial chromosomes are SUPERCOILED to fit into a cell (i.e., DNA into the cytoplasm)
  • Bacterial cell lysed to release the chromosome (uncoiled double helix of deoxyribonucleic acid)
26
Q

Outline the ‘bacterial genome’

A
  • Plasmids
  • Are additional DNA molecules that are sometimes present
  • Carry additional information (e.g., antibiotic resistance, heavy metal tolerance, fertility and pathogenicity)
27
Q

What do plasmids help us to understand?

A
  • Variability within a species (strains)
  • Pathogenicity of certain strains
  • Spread of antibiotic resistance
  • Used in genetic engineering (plasmid manipulation = easier than chromosome manipulation)
28
Q

Give an overview of bacterial spores

A
  • Also termed endospores
  • Only in a few gram-positive rods: bacillus (aerobe) and clostridium (anaerobe)
  • Only one spore formed per cell
  • Location of spore can aid in identification
  • Light microscopy = spores appear as bright, refractile structures
  • Hydrophobic spore coat is a barrier to aqueous substances
  • Thick spore wall and cortex provides further protection
  • Dehydrated cytoplasm keeps spore in ‘suspended animation’
  • Cryptobiotic = no signs of life
  • Function is survival under adverse conditions (dormant for many years)
  • During spore germination and outgrowth, spore coat and cortex splits open - germinating cell results in outgrowth through split in spore coat