B Cell Biology (Affinity Maturation, Memory, Plasma Cell Homeostasis) Flashcards

1
Q

Why are memory cells able to respond quickly?

A

proteins necessary for division (Cdks etc) are already synthesised

cells preloaded with effector molecules eg IFN-γ, TNF-α

elevated levels of signalling compounds and transcription factors (eg Lck in T cells)

higher frequency than naive cells (a 1000 fold increase)

higher Ab affinity (affinity maturation)

some are resident in tissues

epigenetic priming: effector genes are much more accessible eg e.g., histone acetylation, chromatin remodeling

Memory cells express higher levels of cytokine receptors, such as IL-7R and IL-15R
- makes them more sensitive to environment

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2
Q

What are some characteristics of memory B cells?

A
  • express switched isotypes (some remain IgM+)
  • express somatically mutated Ig V genes
  • express higher affinity Ig
  • lower activation thresholds
  • increased levels of adhesion molecules (CD44, LFA-1) = improved interactions w APCs and increased recruitment to site of inflammation

plasma cells are not memory cells as they have finite lifespans

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3
Q

Why do memory T cells change the isoform of CD45 they express?

A
  • naive resting T cells express high molecular weight forms of CD45 (RA, RB, and RC)
  • lose expression of these after antigenic stimulation
    – arise in differences with alternative splicing

– shorter isoform brings the phosphatase domain of CD45 closer to the TCR signaling complex
– Enhances the dephosphorylation of inhibitory sites on Lck , amplifying downstream signaling
= more efficient and rapid T cell activation in memory cells

– used as a marker for memory T cells, however reversion to RA, RB, or RC expression does occur

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4
Q

How does memory cell differentiation occur?

A

asymmetry occurs at a population level rather than a cellular level

ie populations exposed to different microenvironments diverge

low Ag +/- cytokines = memory
high Ag + cytokines = effector

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5
Q

What TFs are important for differentiation of CD8 into SLEC or memory cells?

A

Blimp1: induces activated T cell/early effector to become short lived effector cell (SLEC)
– expresses low IL-7R, important survival factor

Bcl6: induces activated T cell/early effector to become a memory precursor effector cell, continued exposure = memory cells
– actively downregulates Blipm1

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6
Q

What are the different types of B cell and what induces them?

A

short-lived plasma cells: Blimp1

germinal centre B cells: exposure of activated B cells to Bcl6
– these B cell produce Bcl6 for upkeep of germinal centre

long lived plasma cells: exposure of Blimp1 to gc B cells

memory B cells: arise from gc B cells

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7
Q

What are two populations of memory cells?

A
  • those that differentiate and respond upond reinfection – effector memory
  • those that renew memory pool

if all memory cell differentiated upon reinfection then the memory would be lost

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8
Q

T cell memory is impaired in mice without B cells.

A

experiments show that compared to WT mice, mice without B cells have a lower number of memory T cells after 12 weeks

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9
Q

How do B cells act as decoys to create memory T cells?

A

During T cell contraction, T cells express both Fas and FasL on their surface, clearing cells as they can cause each other to apoptose

B cells also express Fas, so can act as decoys to cause T cells to become memory in the germinal centre due to interactions w CD4

some B cells may be lost

this is hypothetical

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10
Q

How are memory B cells tracked in vivo?

A

phycoerythrin bins B220 memory B cells

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11
Q

How are memory T cells tracked in vivo?

A

MHC class II tetramers can bind to the T cell receptors (TCRs) of CD4+ T cells that specifically recognize the peptide-MHC complex

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12
Q

What is homeostatic regulation of lymphocytes?

A

all lymphocytes are under constant selective pressure as the size of the lymphoid system is controlled within strict limits
– if many lymphocytes are injected , the immune system does not incorporate them all
– after a couple of days it returns to its normal size
– there appear to be a finite number or niches in the immune system that lymphocytes can occupy
eg access to DCs and cytokines

once all niches are occupied, older memory cells are deleted

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13
Q

How do we know about lymphocytic survival niches?

A

when memory T cells (from TCR transgenic mice) are transferred into immunodeficient hosts (eg RAG -/- or SCID) the number of niches is not longer limiting

lifespans may be extended compared to that in a complete immune system

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14
Q

What are some factors influencing memory survival?

A
  • antigen persistence (on FDC or other sites eg persistent viruses)
  • re-exposure to priming agent (pathogen)
  • exposure to a cross-reacting organism/antigen
  • non-specific signals (cytokines)

oldest memory cells lose survival receptors eg IL-15R (homeostatic attrition)

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15
Q

Why does memory not equal protective immunity?

A

memory is an accelerated, enhance response
– may not give absolute protection from re-infection

protective immunity provides complete protection from re-infection
– provided by effector cells and tissue-resident effector memory cells
– dependent on antigen

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16
Q

How is measles an example of memory?

A

immunity to measles was long lived
- re-exposure to virus was not essential for long term protective immunity

not evidence for antigen free survival
- persists within the body (CNS)

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17
Q

How does the BCR signal?

A

BCR = membrane Immunoglobulin (mIg)

signalling heterodimer composed of Igalpha and Igbeta subunits (CD79a and CD70b)

Both have ITAMs in their cytoplasmic tails

When an antigen binds to the BCR:
receptor cross-linking occurs, bringing multiple BCRs together on the membran

This clustering brings Igα/Igβ molecules into close proximity, facilitating their phosphorylation by
Src-family kinases (e.g., Lyn, Fyn, or Blk) which phosphorylate the ITAMs

Phosphorylated ITAMs act as docking sites for downstream signaling molecules eg Syk

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18
Q

What is the structure of the B cell surrogate light chain?

A

composed of two non-polymorphic proteins:

  1. VpreB: mimics variable region of Ig light chain
  2. λ5: mimics constant region of Ig light chain

these two proteins pair w a successfully rearranged Ig heavy chain (igH) to form the pre-BCR

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19
Q

What is the role of the surrogate light chain in B cell development?

A

– allows the testing of a newly rearranged heavy chain for functionality before the light chain genes undergo rearrangement

– pre-BCR signals the pre-B cell to proliferate and halt further heavy chain rearrangement, a process known as allelic exclusion

– After successful heavy chain testing, the surrogate light chain signals for the rearrangement of light chain genes (κ or λ), ultimately leading to the formation of a complete BCR

– If the heavy chain fails to pair with the surrogate light chain, the cell undergoes apoptosis, ensuring that only B cells with functional pre-BCRs progress in development

20
Q

What are transitional B cells?

A

immature B cells that have recently exited the bone marrow and entered the peripheral blood and secondary lymphoid organs

T1:
– short lived and highly sensitive to apoptosis
– low CD21 and CD23 expression

which mature into

T2
– more resistant to apoptosis
– increased expression of CD21 and CD23

21
Q

What is BAFF?

A

B cell activating factor of the TNF family

critical survival factor for the B cell lineage

blocking BAFF causes loss of mature B cells from secondary lymphoid organs

22
Q

What are the different areas of the spleen?

A

PALS
- T zone

primary follicle
- B cells

marginal zone
- IgM, IgD, and double +ve B cells

germinal centre (within follicle)
- mature B cells

23
Q

What are B1 B cells?

A
  • evolutionarily early
  • make cross-reactive antibodies
  • make T-independent antibody responses
  • make mainly IgM and IgG3
24
Q

What are B2 B cells?

A
  • majority of B cells
  • make T dependent Ab responses
  • make IgM and all switched isotypes
25
Q

What are the 3 modes of B cell activation?

A

T-independent:
TI-1: mitogen (LPS, bacterial products)
TI-2: Ig cross-linking (bacterial polysaccharides)

T-dependent:
TD: protein antigens

26
Q

A monovalent Ag does not cross-link the BCR, how does it induce signalling?

A

Dissociation Activation Model

BCRs are oligomeric clusters in their resting configuration
– In this state, the receptors are associated in inactive complexes, and Lyn, a key kinase for signalling, remains inactive

A monovalent antigen binds to a single BCR, disrupting the oligomeric complexes and “opening” the BCR
This disruption allows Lyn to associate with the BCR, leading to the initiation of downstream signalling
Thus, a signal is generated even with monovalent antigens

however crosslinking model is primary mode of activation

27
Q

How does complement help B cells activate?

A

If antigen is tagged w complement, eg C3d, it reduces amount of antigen needed for B cell activation by up to 1000-fold

28
Q

Why is clustering of receptors crucial for BCR signalling?

A

clustering of Ag receptors allows receptor-associated kinases to phosphorylate ITAMs

Syk binds to doubly phosphorylated ITAMs and is activated on binding

29
Q

What does binding of antigen do in the context of antigen presentation?

A

up-regulation of MHC class II and co-stimulatory molecules (B7 = CD80/86) and facilitates uptake/processing of antigen

30
Q

How is T-I activation of B cellls made into a strong signal?

A

help from T cells
- antigen activation
- co-stimulation
– CD80/86 binding to CD28 on T cells
– CD40 binding to CD40L

without this, B cells would undergo anergy or death/deletion (i.e tolerance)

31
Q

What is the difference between B and T cell antigen recognition?

A

B cells can recognise free antigen, which has differently exposed epitopes due to protein conformation

T cell recognises short, linear epitopes bound to MHC

32
Q

What is linked recognition?

A

A B cell recognises a particular epitope on an antigen (eg A), but can present multiple epitopes from that same antigen (eg E)

An anti-E T cell that doesn’t recognise A can still recognise E that is presented by the anti-A B cell

33
Q

How has linked recognition been shown experimentally

A

hapten, a small molecule that does not elicit an immune response on its own, but ,must be linked to a larger carrier protein (Y)

anti-hapten B cell
anti-Y T cell

B cell recognise hapten which is linked to carrier protein Y, which elicits a T cell response

if carrier protein X is used, no T cell activation
== linked recognition

34
Q

What are different outcomes of B-T cell interaction?

A
  • Ab response

(these occur in germinal centres)
- proliferation
- Ig class switching
- somatic hypermutation
- antibody production
- formation of memory cells

35
Q

How are helper T cells activated?

A

interactions with dendritic cells

T cell CD40L -> DC CD40

36
Q

Give examples of cytokines which direct Ig isotype switching?

A

IFNgamma –> IgG2a or IgG3

TGF-beta –> IgA or IgG2b

IL-4 –> IgE or IgG1

IL-2, 4, 5 –> IgM

works by regulating the transcription of switch regions (S regions) upstream of the C genes
This makes specific S regions accessible to AID, determining which antibody isotype the B cell will produce

37
Q

What are the different outcomes for immature B cell of binding Ag in BM?

A

recognition of multivalent self molecule
– arrest of development and continued light chain rearrangement
– if new receptor is still self-reactive, B cell undergoes apoptosis
– otherwise immature B cell migrates to periphery

recognition of soluble self molecule
– migration of B cell to periphery
– put into an anergic state

low affinity non-cross-linking self molecule
– migrates to periphery
– B cell matures as normal, “clonally ignorant”
– because interaction w self-antigen is weak and does not respond to them under normal physiological conditions
– this prevents unnecessary elimination of B cells that could recognise antigens structurally similar to self antigens

38
Q

How do B and T cells move to their respective areas in the lymph node from the blood?

A

localisation controlled by differential expression of chemokine receptors responding to opposing chemokine gradients

eg T zone
- SLC/CCL21
– SLC = SLT chemokine

  • ELC/CCL19
    – ELC = EBV induce molecule 1 ligand chemokine

eg follicle
- BLC/CXCL13
– BLC = b lymphocyte chemokine

39
Q

What are FDCs?

A

follicular dendritic cells

derived from perivascular precursors, not haematopoietic origin

present antigen in germinal centres

40
Q

What are properties of FDC antigen?

A
  • Antigen can be stored in native form for very long periods (>1 year).
  • FDC do not internalise antigen or present it to T cells.
  • Intermediary APC required for presentation to T cells
41
Q

How do antigens enter lymph nodes to be given to FDCs and presented to B cells?

A
  • Antigens (eg. bacteria, immune complexes) enter lymph nodes in the subcapsular sinus (from afferent lymphatics that drain tissues)
  • Antigens captured by macrophages in the subcapular sinus
  • B cells acquire antigen from these macrophages and transport it to FDC. Initially, they use CR2 to pick up antigen (some Ag-specific cells use BCR)
  • antigen stored in beads: iccosomes
  • Antigen-specific B cells tear antigen from the FDC (some FDC membrane is also acquired)
42
Q

What are Tfh?

A

T follicular helper cells

  • needed for GC response
  • dependent on B cells

express Bcl6, important for generation of GC
– incorporate into GCs

differentiate from CD4 T cells

43
Q

What is the function of germinal centres?

A
  • clonal expansion of Ag-specific B cells
  • affinity maturation
    – somatic hypermutation
    – antigenic selection

crucial components of memory B cell formation and long-lived plasma cell populations (in BM)

44
Q

What two populations of B cells present in GCs?

A

centroblasts
– in cell cycle
– localised in dark zone
– proliferation/hypermutation

centrocytes
– out of cell cycle
– localised in light zone
– selection -> rescue

45
Q

What are the two stages of selection in a GC?

A

Stage 1
– antigenic selection on FDC
– bcl-2 independent short term rescue

Stage 2
– induction of CD40L signal
–> bcl-dependent longterm rescue
– signal and exit to the memory pool

46
Q

What evidence shows FDC are crucial for mutation and selection of B cells?

A

LTalpha KO mice have no FCD
– exhibit mutation and selection but much less efficient

selection mediated by FDC bound antigen

47
Q

Compare a mature B cell and a plasma cell.

A

Mature B Cell
Primary Function: Antigen recognition and presentation.
Antibody Expression: Membrane-bound (as part of the BCR).
Morphology: Small, with a dense nucleus
Location: Secondary lymphoid organs (e.g., lymph nodes, spleen) and circulating in the blood.
Lifespan: Variable, ranging from weeks to years depending on activation and differentiation status.

Plasma Cell
Primary Function: Antibody secretion
Antibody Expression: Secreted antibodies
Morphology: Large cell, abundant cytoplasm
Location: Bone marrow, mucosal tissues, or secondary lymphoid organs (for short-lived plasma cells).
Lifespan: Short-lived (days) in secondary lymphoid organs or long-lived (years) in the bone marrow

undergone class switching and somatic hypermutation in GC