au14_-_pediatric_dent_final_exam_20141210195054 Flashcards
What are the 3 ways discussed to detect bacterial species? What are the limitations of each?
- MICROSCOPY: difficult to distinguish similar morphotypes- CULTIVATION: special nutrient requirements; inhibition of some species by others; minor species overgrown; slow growing species overgrown- 16S SEQUENCING: rDNA gene alignments construct phylogenetic trees (not really a limitation…)
In the oral cavity, what proportion of the species have been cultivated?
over half (300+ species)
How many organisms are present in the oral cavity by cultivation? By 16 S sequence diversity? How many species are in each person?
- by cultivation, 300+ species- by 16S sequence diversity, around 700 species- each person harbors 100-200 species
The mouth is an open system. We have ___ species vs. ___ of the oral cavity that grow.
- transient species- true residents
What factors lead to bacterial diversity in the species that are adapted to the oral cavity and those who are transient?
contact with:- water- soil- plants- animals- other humans- other body sites
What are the 4 purposes/goals of the Human Microbiome Project?
- determining whether individuals share a core human microbiome- understanding whether changes in the human microbiome can be correlated with changes in human health- developing the new technological and bioinformatic tools needed to support these goals- addressing the ethical, legal, and social implications raised by human microbiome research
True or false: Each of us includes more bacterial cells than human cells.
true (our microbiota includes many-fold more DNA variety than our human genome)
What are the different body sites that have distinct microbial communities?
- oral cavity- gastrointestinal- urogenital- skin- nasal
Describe how the human oral microbiome is acquired. (include the study that addressed this)
- study tested the hygiene hypothesis (“don’t kiss babies or share utensils to avoid transmission of S. mutans)- study looked at babies in the NICU vs. babies that were home-reared- after 1 day, the difference between the babies was significant, but after 3 months, the babies were very similar in bacterial load
What is the definition of ecology? Of a niche?
- ECOLOGY: study of the interrelationships of organisms and their environment- NICHE: a specific combination of conditions that are necessary for the survival of a particular organism; parameters may be physical, chemical, and biological
The mouth has multiple niches:- non-shedding hard surfaces of teeth are unique because microorganisms can form ___- microorganisms can invade soft tissues, as in ___ and ___.
- stable, thick biofilms called “dental plaque”- periapical and odontogenic infections
How do oral structures change over time?
- teeth erupt and are lost- pockets form (caused by bacteria)- injuries occur
Name the oral surfaces to which bacterial adhere.
SOFT-TISSUE SURFACES:- sulcus, tongue, mucosa, gingivaHARD SURFACES:- supragingival: fissures (*most common), proximal surfaces, buccal and lingual enamel surfaces, cementum, restorations, calculus- subgingival: enamel, cementum, restorations, calculus
Some bacteria are ___, but most of the bacteria that cause dental problems and many medical problems are ___.
- planktonic (floating in water)- sessile (attached to surface of biofilm)
Biofilms are made up of ___ and ___ in a ___ environment.
- adherent microorganisms- extracellular matrix- aqueous environment
What is the extracellular matrix of a biofilm?
- bacteria adhere to surfaces in aqueous environments and excrete a slimy glue-like substance that can anchor them to surfaces such as tooth, metal, plastics, medical implant materials, and tissue- sticky material that hold the biofilm together is called the extracellular matrix!- water flows through channels in the matrix like a circulatory system
What is the biofilm life cycle?
- attachment- growth to mature biofilm community- detachment of cells to seed a new biofilm formation
Describe the composition of a biofilm.
- can be formed by a single bacterial species, but more often, includes many species of bacteria- may also include other microorganisms like fungi, algae, or protozoa
What is quorum sensing?
used by bacteria to know when there is a group large enough to do a specific activity
When are biofilm-adaptive genes turned on?
- bacteria detect surfaces- bacteria detect each other (quorum sensing)- signals pass between bacteria
How do multiple species co-exist and cooperate in a biofilm?
- provide nutrients for each other (food chains)- remove toxins- inter- and intra-species signaling is important- “division of labor” within the same species and among species
What are biofilms resistant to?
- antibiotics- host defense- mechanical disruption
True or false: Antibiotic doses that kill biofilm cells need to be increased as much as 1000-fold to kill suspended cells.
FALSE. Antibiotic doses that kill suspended cells need to be increased as much as 1000-fold to kill biofilm cells.
What are the primary mechanisms for biofilm antimicrobial resistance?
- slowing of diffusion- “persister cells” that are alive but metabolically inactive survive and repopulate- close proximity and exchange of resistance genes