Antibodies Flashcards

1
Q

Differences between an innate and adaptive response?

A

Innate is fast, non specific. Uses phagocytes and natural killer cells, and humoral complement system and cytokines
Adaptive; slow response, highly specific, one term memory and involves T helped cells, cytotoxic T cels and humoral B cells

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2
Q

What is the structure of antibodies?

A

2 heavy and 2 light chains. Each has a variable region with 2 antigen binding sites. and a constant domain which remains the same. 4 polypeptide chains joined covalently.

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3
Q

Wha is the complementarity determining region?

A

Region within the antigen binding site which is hyper variable.

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4
Q

What is an epitope?

A

Area of an antigen that is detected by the immune system and binds to the antigen binding site of antibodies.

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5
Q

How do antibodies and antigens bind?

A

antigen binding site binds non covalently to epitope: H bonds, electrostatic attractions, VdWs.

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6
Q

What are the key features of a polyclonal immune response?

A

Diverse and specific.

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7
Q

Why are antigens good reagents? (3)

A

They have a high specificity, a good avidity (able to bind to any molecule, even if synthetic) and don’t require a carrier molecule.

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8
Q

What should you consider when creating polyclonal antisera? (4)

A

Cost, amount of antigen available, amount of antibody produced, phylogenetic relationship (greater phylogenetic distance means increased immune response - more product)

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9
Q

How are polyclonal antisera produced?

A

immunisation activated B cells and a booster injection several weeks later increases antibody production and allows class switching to IgG. after 4-8 weeks the blood is collected and serum containing IgG is collected.

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10
Q

Why can overproduction of monoclonal antibodies be dangerous?

A

can cause uncontrolled growth of a single B lymphocyte - tumours form.

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11
Q

How are monoclonal antibody reagents grown?

A

isolation of a B cell and growth in vitro - only one antibody grown.

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12
Q

Why are monoclonal antibodies useful as a reagent? (4)

A

High speciality, low cross receptivity with unrelated Ag, inexhaustible supply, commercial applications in diagnostics and vaccinations.

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13
Q

How are monoclonal antibodies produced?

A

an animal is immunised with the antigen of choice, after the booster shot, the B cells producing the antibodies are collected.
B cells from a tumour are also collected - these cells do not produce Ab’s.The cancerous B cells and normal cells are fused in a gel, and immortalised.
The cells are then treated with a drug that will kill the cancerous cells - killing off any unfused cells. the fused cells are immortal from both drug treatment and native B cells as they are both cancerous and native.
These fused hybridomas are grown in cultures and tested for specific antibody by testing against Ag.
Thus creating a monoclonal antibody as derived from a single B cell.

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14
Q

What is huminisation?

A

Where the antibody derived from the animal is combined with the constant region from a human antibody - making it useable in humans.

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15
Q

What is biopharming in relationship to antibodies?

A

Where plants are genetically modified to express antibodies.

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16
Q

What are the advantages of plantibodies?

A

More efficient expression, cheaper purification, stable storage in seeds, can be post translationally modified- improve activity.

17
Q

Outline the process of immunoblotting.

A

Proteins are denatured and separated on a polyacrlyamide gel using a denaturing agent and electric current. This separates proteins by length and charge.
The proteins are then stained in a gel to visualise them, they are transferred to a nitrocellulose sheet by an electric current- either wet or semidry transfer. Known marker proteins can show the length of proteins.
On the nitrocellulose sheet the proteins are hybridised to a specific labelled antibody, washed and hybridised to a secondary antibody specific to the primary. the secondary antibody is conjugated to a marker which allows you to visualise the protein.

18
Q

What markers are used on the secondary antibody to visualise the proteins?

A

Fluorescence, cheti luminescent or a dye.

19
Q

Uses of immunoblotting? (3)

A

Determines size of protein.
semi quantitive - quantity of protein.
Screen samples for antibody presence.

20
Q

Uses of immunocapture?

A

Pregnancy tests - specific antibody on plane will capture antigen as it is washed over it, in a pregnancy tests detects ß HCG .

Rapid ELISA for FluA antigens

21
Q

what is ELISA?

A

Enzyme linked immunosorbent assay. plate based assay technique that captures substances as they move through the plate.

22
Q

What is immunoprecipitation?

A

Separating an antigen protein out of a solution by adding a complimentary antigen and washing out the rest of the sample. An Fc binding protein aids binding of the Ag/Ab complex.

23
Q

Uses of immunoprecipitation?

A

detect proteins of interest,
characterise weight of protein.
study structure of proteins
Detect antigen in a sample.

24
Q

What is affinity chromatography?

A

Purification of a soluble molecule from a solution, requires specific and reversible binding.
Ligand antibody is coupled to a solid matrix in a chromatography column.
Solution washed through, allowing binding to ligand, and solution is washed away.
Bound molecule is eluted off at a later point - allowing you to study composition of the elution.

25
Q

Why is affinity chromatography used at a large scale?

A

Re usable and can purify large quantities of solution.

26
Q

What is immunomagnetic separation?

A

Antibody bound to magnetic beads and mixed with antigens in a sample - the antigens bind and a magnet is applied.
the supernatant is washed away, leaving Ab and Ag, this complex is re-suspended and magnetic beads eluted away.

27
Q

What is immunomagnetic separation used for?

A

Purification fo pathogen specific Abs form complex samples.