Animal models: virology Flashcards

1
Q

What is the definition of an ‘animal model’?

A

Living organism, in which a spontaneous or induced pathological process can be investigated, and in which the phenomenon in one or more respects resembles the same phenomenon in humans

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2
Q

What are animal models historically known for?

A

For obtaining information on physiology and disease

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3
Q

What are animal models heavily regulated by? (3)

A
  • Legislation
  • Guidelines
  • Experimental design requirements
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4
Q

What are the three R’s?

A
  • Refine procedures (most humane way)
  • Reduce the number of animals
  • Replace with non-animal alternatives
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5
Q

Which guidelines can be used for reporting animal research?

A

ARRIVE

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6
Q

Which guidelines can be used for planning animal research?

A

GUIDE

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7
Q

What are important factors when choosing the correct animal model? (3)

A
  • Consider research question
  • Susceptibility, tissue (tropism), clinical signs
  • Comparability human vs. animal
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8
Q

What are important factors to consider about the chosen animal model (6)?

A
  • Age
  • Sex
  • Genetic background
  • Microbiological status
  • Comorbidities
  • Variation
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9
Q

Name general influential factors and important aspects of animal models in virology (5)

A
  • Acclimatization to new housing in animal facility
  • Housing
  • Biology and behavior of the animal model
  • Containment level
  • Sampling (which, when, how often)
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10
Q

Why is acclimatization to new housing in animal facility important?

A

Provides stress-free animals at the start of the experiment

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11
Q

Which clinical signs and clinical scores can be used to measure in animal models in virology? (4)

A
  • Body weight
  • Appearance
  • Behaviour/activity
  • Body temperature
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12
Q

What are ‘other’ factors to consider when choosing an animal model in virology? (3)

A
  • Humane endpoints
  • Anesthesia and euthanasia
  • Post experimental analysis
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13
Q

What is important about anesthesia and euthanasia? (2)

A
  • Should not interfere with read-outs
  • Should not cause excessive discomfort
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14
Q

What factors should be considered about the reagents (vaccines, antivirals, etc)? (4)

A
  • Adjuvant
  • Concentration
  • Route of administration
  • Schedule
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15
Q

What factors do you need to consider when selecting the virus for the experiment? (6)

A
  • Strain
  • Origin and propagation of virus
  • Which titer do you give to animals?
  • Quality of virus
  • Stability
  • Alterations necessary?
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16
Q

Which animal model is often the first choice to study unknown human viruses?

A

Non-human primates (NHP)

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17
Q

Why do you always have to think of different ways to answer the question? (with respect to NHP)

A

NHP are very expensive and ethically questionable

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18
Q

Name River’s modified Koch’s postulates (6)

A
  • Virus isolation
  • Virus propagation
  • Filtration
  • Inoculation of & disease in macaques
  • Re-isolation & PCR of virus from diseased animals
  • Specific immune responses to the virus in animals
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19
Q

Why do you look into specific immune response to the virus in animals?

A

Confirms that agent causes the disease in animals

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20
Q

Name the common animal models for SARS-CoV (4)

A
  • NHP
  • Golden Syrian hamster
  • Ferrets
  • Transgenic mice
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21
Q

MERS-CoV: Why did ferrets not seroconvert after intranasal/intratracheal inoculation with high dose of virus?

A

Ferret DDP4 does not bind MERS-CoV

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22
Q

What can you do if there is no correct animal model?

A

Adaptation of virus to host by serial passaging in host of interest

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23
Q

Summary: name three important factors to consider when choosing an animal model for MERS-CoV experiments?

A
  • Diversity: genomic analysis of different MERS-CoV
  • Receptor: sequence and binding analysis of DPP4 in different animals
  • Host: analysis of the host response in different animals
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24
Q

What are common animal models used for MERS-CoV experiments? (3) Which is most often used?

A
  • Rabbits
  • Healthy, young NHPs
  • Transgenic mice with hDPP4 receptors (most often used)
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25
What can also influence the outcome of experiments?
Comorbidities
26
SARS-CoV2: Which factor is very influential in experiments? Why?
Propagation --> causes cell culture adaptations in multibasic cleavage site
27
Why happens when there are cell culture adaptations in the multibasic cleavage site? How can this be prevented?
Changes infection proficiency/transmission efficiency --> can be prevented through using other propagation systems
28
What are animal models used for SARS-CoV2? Which is most often used? (4)
- Transgenic mouse - Hamster (most often used) - Ferret - NHP
29
Why are hamsters most often used as an animal model for SARS-CoV2? (3)
- Shows clinical symptoms (body weight loss) - Viral shedding - Replication in URT and LRT
30
What has the hamster model demonstrated? (4)
- Effect of age - Effect of sex - Effect of comorbidities - Effect of precise species
31
What is the main disadvantage of ferrets as a model for studying SARS-CoV2?
Only show replication in the URT
32
Describe the new lung xenograft mouse model
Human lung is grown in a mouse model
33
What is the main advantage of the lung xenograft mouse model?
Susceptible to all human coronaviruses
34
What are the problems in developing an appropriate animal model for zoonotic coronaviruses? (3)
- Viruses are genetically diverse, as they are adapting to a new host - Adaptations may affect the interaction with the host - Comorbidities influence the outcome of infection
35
Why is using an animal model useful when studying influenza viruses? (3)
- Pathogenesis studies involving pathology are difficult in humans - Quality of pathology is low in human fatal cases - Cannot study vaccine protection by challenge
36
Influenza: Why are pathogenesis studies involving pathology difficult in humans?
People often present to healthcare in a later stadium of disease --> initial pathology hard to study
37
Influenza: by using animal models, we can .. (5)
- Set the timing of pathology - Study the course and the evolution of the disease - Detect (early) events - Have group size to reach statistical significance - Challenge with pathogenic strains
38
Influenza: Name model components related to animal species for human disease (5)
- Susceptibility - Symptom similarity - Anatomy/histology of target organ similarity - Immune response/status similarity - Cell tropism of pathogen similarity
39
Name examples of aspects of disease that you could try to reproduce in the animal model (4)
- Pathology - Interplay between pathogen and immune system - Transmission - Vaccination
40
Influenza: which pathogen characteristics do you need to consider? (4)
- Passage history - Wild-type vs. recombinant - Dose of inoculum - Volume of inoculum
41
What is important to consider when using a wild-type virus?
- How was it obtained? - Are there quasi-species?
42
What is important to consider when using a recombinant virus?
Is it clonal or are there still variations?
43
The dose of inoculum is generally much lower/higher than in humans?
Higher
44
What are the options when choosing a route of inoculation? (8)
- Intranasal - Intratracheal - Intraocular - Intravenous - Intra-oesophageal - Feeding - Contact - Aerosol
45
Which route of inoculation is often used in transmission experiments?
Intranasal
46
Which route of inoculation is often used to study viral replication?
Intratracheal
47
Name model components related to methodology (2)
- Frequency of monitoring - Time points
48
What do you need to consider for time points?
Kinetics of disease in animal/human
49
During the 2009 H1N1 outbreak, there was a need for which animal model?
Challenge model, that represented the disease as seen in humans
50
What are the specific advantages of using ferrets as an animal model in influenza research? (5)
- Receptor type and distribution similar to humans - Similar replication dynamics - Similar symptoms/clinical illness - Anatomy/histology: similar virus-associated pathological changes - Virus attachment similar
51
Influenza: mice are not naturally susceptible to these viruses, how can these viruses be made mice specific?
Passaging the viruses in mice
52
Which aspect of disease was studied in the H1N1 outbreak?
Diffuse alveolar damage (DAD)
53
Why is intranasal inoculation not a good model to study DAD?
Causes high virus replication in URT, some in trachea/bronchi, but NO replication in lung/DAD
54
Why is the cross reactivity of immune response between different H5 viruses very low?
Strongly varied antigenic responses
55
Name three ways for respiratory virus transmission
- Indirect contact - Direct contact - Airborne --> aerosol or droplets
56
What is a good indication for whether new viruses are transmissible in humans?
Avian influenza viruses are usually not transmitted in ferrets
57
What encompasses the EMC ferret transmission model?
Donor + direct contact --> indirect recipient
58
What are characteristics of guinea pigs for influenza research? (4)
- Less experience - Certainly different in pathogenesis - Easier to handle - Smaller
59
Why are environmental chambers useful when studying viral transmission?
The effect of temperature and humidity on virus transmission efficiency can be studied
60
Why may contact transmission between animals be a poor model for contact transmission between humans?
Animal behavior very different from humans
61
Why may airborne transmission between animals be a better model for transmission between humans?
More realistic due to similar anatomy, behavior less of a concern
62
For what purposes are transmission studies in animals useful to address fundamental questions in virology? (3)
- Epidemiology - Climatic factors - Risk assessment