AMT Lab/Phleb basics Flashcards
Centrifugal force depends on 3 variables…
and separates based on…
mass, speed, radius
density
speed expressed as…
force generated express as…or…
angular velocity value…
r=
revolutions/min(rpm)
relative centrifugal force/RCF or gravity (g)
1.118x10*-5
r=radius in cm from center of axis to bottom
Equation for speed of centrifuge related to RCF/RCF=
1.118x10*-5 x r x (rpm)’2
*10 to neg 5
*2=squared
CLSI
clinical and lab standards institute
CLSI recommend blood be centrifuged at an RCF of…or…for…min
1,000-1200xg
OR
3500 rpm
for 10-15 min
…or… centrifuge where tubes are horizontal position when spinning and in a vertical position when stopped
Horizontal head or swinging bucket
…or…centrifuge where tubes are at angle in sample bucket, allowing small particles to sediment faster
fixed angle or angle head
Centrifuges that separate small liquid samples of <=2mL in plastic conical shaped containers w/integral snap cap
microcentrifuges
High speed centrifuge up to 150,000rpm to separate chylomicrons from serum
ultracentrifuge
strobe light determines…
speed
Check speed of centrifuge with…or….
every…
tachometer or strobe light, every 6mths
NIST
national institute of standards and technology
Check time with…timer, every…
NIST traceable timer, 6mths
centrifuge used to sediment small particles faster
fixed angle/angle head
centrifuge used to separate chylomicrons from serum
ultra
Glassware/plasticware must fall into class…or….
Institute that recommends tolerance limits…
Preferred glassware class…
Usually made of… …
Class A, B
NIST recommended
Preferred is A and made of borosilicate glass
Pipette that is electronic, prepare multiple samples…
Pipette that are handheld, disposable tips w/air displacement or positive displacement
Automatic pipette
semi-automated pipette
Mechanism of action which relies on a piston for creating suction to draw the sample into a disposable tip that’s changed after use
A certain volume of air remains between the piston and the liquid.
air displacement
ie. pipettes used in lab
Mechanism of action which has a moving piston in pipepette tip or barrel much like a hypodermic syringe, doens’t require a different tip and is used as a dispenser.
The piston is in direct contact with the liquid.
Positive displacment
ie. osmo pipette
Which pipete requires recalibration…
how often per year…
Two methods used to calibrate…
automatic pipettes, 4x/yr
Semiautomatic also uses this method
gravimetric and volumetric
Calibration that verifies accuracy by the amt of water dispensed by pipette.
Weight of water is proportional to the volume dispensed.
Weight=volume
Accuracy of volume is dispensed and adjusted accordingly to the weight
Gravimetric
Calibration that verifies accuracy of amt of dye thats pipetted into a specific volume of water and is read spectrophotometrically.
absorbance=amount
volumetric
Which class of glassware doesn’t need to be recalibrated
A
Handheld that require bulb to apply suction
manual
…or… is glass pipette that has a bulb in the middle w/tapered delivery tip
accuracy is 1:….
transfer or volumetric
1:1000
..or…Pipette thats uniform in diameter w/tapered delivery tip
measuring or graduated
Pipettte with two frosted bands
Last drop blown outb after pipette drains
Pipete must be rinsed w/solvent after first liquid has drained
To contain, TC
Pipette filled and allowed to drain by gravity. Held vertically, tip placed against side of vessel
To deliver, TD
Pipette filled, drained and remaining fluid in tip blown out, has two frosted bands at top
blow out
Pipette held in vertical position w/tip against vessel and drained by gravity
self draining, ie. TD
Organization that maintains standards for temps
NIST
national institute of standards and tech
Thermistor probe is also called
an electronic probe
3 types of thermometers
mercury/liquid in glass
digital
electronic/themistor probes
Gold/platinum thermometer calibrated on international temp scale w/lead wires and sheath
NIST
Standard ref material
(SRM)
All NIST certified thermometers come with a…
NIST traceable thermometers come with
NIST cert of calibration
NIST cert of traceability.
certificate issued by manufacturer
Temp for incubators, heat blocks, water baths
36-38C
RT
20-24C
Lab fridge…
BB fridge…
lab 2-8C
BB 1-6C
Lab freezer…
BB freezer…
lab <= -20C
BB <=-65C
Sln can use as alternative to lens sln…
sln not to use…
can use methanol, not xylene
Absorbance can be calculated easily from percent transmission using which calculation?
2 – log10 %T
Absorbance can be calculated easily from percent transmission using 2 – log10 %T. If all the light passes through a solution without any absorption, absorbance is zero and the %T is 100%. If all the light is absorbed, %T is zero, and absorption is infinite.
Most common microscope, white light illuminates sample from below…
limitation…
brightfield
low contrast of biological samples
Which immunoassay methodology is the emission of light by molecules in an excited state with a limited amount of heat as the result of a chemical reaction?
Chemiluminescence is the emission of light by molecules in an excited state with a limited amount of heat (luminescence) as the result of a chemical reaction. Chemiluminescent assays are ultrasensitive and are widely used in automated immunoassays and DNA probe assay systems. Chemiluminescence has excellent sensitivity and dynamic range. Chemiluminescent labels can be attached to an antigen or an antibody. Most chemiluminescent reagents and conjugates are stable and relatively nontoxic.
Microscopy improves contrast of unstained, transparent. Quantity of unscatted light/directly transmitted is minimized collecting only light scattered by sample… the field around the specimen (i.e., where there is no specimen to scatter the beam) is generally dark.
Good to view…
Darkfield
spirochetes
Uses electrons to illuminate and creates enlarged image.
Creates higher resolving power and higher magnification.
Uses electrostatic and electromagnetic lenses.
Focuses on a specific plane…
Good to view…or… …
Electron
tissue or tumor markers
Uses fluorescense. High energy light illuminates, emits light of lower frequency.
Dyes used to stain structures…
Good to view…
Fluorescent
ANA
Small phase shifts in the light passing thru transparent specimen showing differences in refractive index as diff in contrast…
An optical microscopy technique that converts phase shifts in light passing through a transparent specimen to brightness changes in the image. Phase shifts themselves are invisible, but become visible when shown as brightness variations.
Good to view…
phase contrast
manual PLT cts
Only transmits polarized light
good to view…
polarized
crystals
Gives 3D image. brightfield can be modified into this. Two split beams of light are polarized and recombined by objective prism.
Recombination gives 3D
Differential interference contrast
Differential Interference Contrast (DIC) is a phase contrast technique that allows transparent structures to be visualized by exploiting changes in refractive index. In contrast to conventional phase contrast techniques, which are based on changes in optical path length, DIC is based on the gradient of the optical path length (rate of change in wavefront shear). Steep gradients produce the high contrast and 3-D relief effect that is characteristic of DIC.
Magnification of:
eyepiece..
low power objective…
high power objective…
oil immersion objective…
eyepiece: 10X
low: 10x
high:40x
oil: 100x
Knob to move slide right and left…
knob to move stage forward and backward…
slide right/left:
x axis motion knob
stage forward/backward:
y axis
Rotating disk under stage to vary intensity/size of cone of light
iris diaphram
Focuses light onto specimen
condenser lens
part that connects the eyepiece to the revolving nosepiece/lenses
tube
holds objective lenses
nosepiece
focuses light onto specimen, can move up and down
condenser lens
English units of measurement
3 for length..
1 mass..
4 for volume…
length: inch,foot, yard
mass: lb
volume: cup, pint, quart, gallon
Metric system is based on decimal system, multiples of ten
length…
mass..
volume…
length: meter
mass: gram
volume: liter
luminous intensity in SI
candela
International System of Units/SI worldwide standardized system, recommended by CLSI
Length:
Mass:
Time:
amt sub:
temp:
electric current:
luminous intensity:
Length: meter
Mass: kg
Time: sec
amt sub: mole
temp: Kelvin
electric current: ampere
luminous intensity: candela
Deka
Deka…10*1
Hecto
Hecto…10*2
Kilo….
Kilo….10*3
Mega..
mega: 10 *6
giga
giga 10*9
Deci
Deci: 10*-1
centi..
Centi:10*-2
milli
milli: 10*-3
micro
micro: 10*-6
Nano:
Nano: 10*-9
pico
pico: 10*-12
femto
femto: 10*-15
Celcius from farenheit
5/9x (F-32)
Farenheit from Celcius
(9/5)C +32
Kelvin from Celsius
C+273
95F to C
5/9x(95-32)=35C
95C to F
(9/5x95)+32=203F
95C to Kelvin
95+273=368K
BUN/Creatinine ratio
BUN 24.0
Creatinine 2.4
Give ratio
10:1
CHOL/HDL ratio
TC 200
HDL 40
5:1
Which cell lines aren’t included in the Myeloid part of M:E calculation
Which cell line is included in Erythroid ratio
Lymphs and Monos
Normoblasts
Write fraction, 1 pt solute to 1 part diluent
1/2
2 is total volume
pt:pt is
pt analyze + total parts (including diluent)
1:1 dilution=
1:2
1:5
1 pt serum+0 pt diluent
1:2 1 pt serum + 1 pt diluent
1:5 1 pt serum + 4 pt diluent
1:2, 1:4, 1:8 etc is a
1:5, 1:25, 1:125 is a
1:10, 1:100 is a
two fold, x2
five fold, x5
ten fold x 10
5% w/w sln equals how much solute to total solution
How much diluent is added
5g solute per 100g total solution
95g diluent added to 5g making 100g sln
Make 100g of 5% w/w sln of NaCl
5g/100g is 5% w/w,
5/100x 100g wanted=need 5g NaCl to 95g diluent to make a total of 100g sln
10% w/v sln equals how much solute to total sln
10g of solute to 100mL of total sln
Make 1,000 ml of 10% w/v of NaOH
10% w/v = 10g/100ml
x 1000mL= 100g of NaOH to add to 900ml diluent to get 1000mL total
2% v/v equals how much solute to sln
2ml/100ml
Make 50mL of a 2% v/v of HCl
2% v/v = 2ml/100ml
x50ml=1ml of HCl added to 49ml diluent equals total of 50ml
Molarity/M
Have g/L, covert to mole/L by get gmw
g/L x mole/L= M
40g NaOH/L, what is molarity?
1 mole NaOH is 40 GMW,
40g/L x 1 mole/40 =1mol/L=1M
Nomality (N)
N=Equivalent/L
1 Equivalent=gmw/valence
Valence is # of H
Osmolality=mOsmol/kg of H2O
Normal range…
calculation…
Normal range 275-295 mOsm/kg
1.86(NA) + GLU/18 + BUN/2.8
Osmolality of
NA 150
Glu 180
BUN 14
294 mOsmol/kg H2)
Osmolar gap
measured-calculated
Concentrated Slns
C1V1=C2V2
1 is, 2 is
1 is known
2 is unknown
PT has 350 PLT ct, how many mL of it needed to get 7mL of with concentration of 250
350x?mL=250x7=5mL
Ratio of SD of a distribution to its arithmetic mean.
Used to express precision and reproducibility of an assay
Coefficient of Variation, CV
Coefficient of Variation, CV used to express…and…
Acceptable CV is…
Used to express precision and reproducibility of an assay
Less than 5% for most analytical systems
/X is
mean
CV formula
Mean is 200, SD is 5, calculate CV
SD/Mean x 100
5/200 x 100 =2.5%
Gives an estimated degree of uncertainty. Probability of estimated range…
expressed as..
Confidence interval
percentage
Mean +- 1 SD=
Mean +- 2 SD=
Mean +- 3 SD=
1SD 68%
2SD 95%
3SD 99%
Given mean (/X) is 9.8, 1 SD is 0.2, calculate 95% confidence limits for control run with mean +- 2SD
1SD= 9.8 +- 0.2
2SD=9.8 +- 0.4, 9.4-10.2
pH formula
pH=pKa +log (base)(acid)
(salt)(acid)
(HCO3)(H2CO3)
Diff between cations and anions…
cations..
anions…
calculation
anion gap
cations: Na, K
anions: Cl, CO2
Na+K - Cl+CO2
Law that states concentration of sub is directly proportional to amt of radiant energy absorbed or inversely proportional to the logarithm of the transmitted radiant energy
2 formulas:
proportional to absorbed
versus
indirectly proportional to transmitted…
Beers Law
A=abc
A=2-log%T
Con unk/Con std = Abs unk/Abs std
Formula for known/unknown absorbance…
Concentration of unknown=
AbsUn/AbsStd x ConcenStd
Abs of 6.0g std is 0.40, abs of unknown is 0.350, concentration of unknown?
0.350/0.40 x 6.0
5.25g
Chain of custody things needed…
PT consent, security seal, to addresee only
store in locked area
Examples of chain of custody
alcohol levels for DUI
DOT drug testing
paternity, DNA
Rape
Medical examiner
Digital version of patient medical history/date
EMR
electronic medical record
Series of computer network that interconnects computers in a limited area like hospital, using network media
LAN
local area network
A computer network that interconnects computers in a broad area such as international, using private or public network trainsports
WAN
wide area network
Comprehenstive integrated info system to manage medical, admin, financial, and legal aspects of a hospital/services
HIS
Hospital info system
Computer software providing services to software apps beyond those available to the operating system
Software that lies between an operating system and the applications running on it. Essentially functioning as hidden translation layer, enables communication and data management for distributed applications.
Middleware
Computerized process for healthcare providers to electronically enter and order medical procedures/lab tests based on predetermined logarithm
CPOE
computerized provider order entry
CLIA stands for
clinical laboratory improvement amendments
CDC stands for
centers for disease control
CMS stands for
centers for medicare/medicaid services
Program that establishes quality standards for all labs…
Published by…and…
CLIA
plublished by CDC and CMS
Organization that categorizes and grades testing based on the complexityof testing
FDA
Two criteria to be waived test
cleared by FDA for home use
simple/accurate as to pose no reasonable risk if performed incorrectly
Examples of waived
blood glucose/cholesterol
urine prego, dipstick/tablet urinalysis
ovulation
nonautomated ESR
spun HCT
Hmg copper sulfate
Hmg by single analyze instruments
Who determines if a test meets criteria for being a waived test
HHS
Dept of Health and Human Services
Complexity?
-manual procedures w/limited steps
-microscopy of urine sediment
-automated heme w/out diff
-primary culture set up
-urine culture/colony ct kits
-gram
moderate
To be categorized as PPM, provider performed microscopy, must meet criteria
-physician, supervised midlevel practioner, dentist
-moderately complex
-main instrument is a microscope
-control materials not available
-specimen is labile, delay would affect results
-need limited handling/processing
Examples of PPM tests
-direct wet mt preps, qualitative semen
-KOH preps
-pinworm, fern
-postcoital direct, qualitative
-urine sediment
-nasal smears wbc, fecal wbc
3 criteria for high complexicity
-any modified FDA cleared test
-lab developed test/LDT
-cytology
Complexity?
-serogrouping/typing
-manual procecures w/multiple steps/reagent prep
-concentration/diff staining
-antimicrobial testing
-gel immunochemical
-electrophoresis, flow
-pap smear
high
These two can conduct an inspection of any accredited lab that’s issued a certificate of accreditation…
How often CLIA requires…
CMS, dept of HHS
2yrs
External quality control to verify accuracy of lab test methods
PT
proficiency testing
Proficiency testing is required by… under…
Usually done …times per year
Not required for…
CMS, under CLIA
3 times per year
not required for waived tests
Approves the PT program that must be enrolled in
HHS
Must maintain copy of PT related forms for minimum of….from the date of PT event
2 yrs
Satisfactory performance on PT testing is…for each analyze
except with immunoheme, some are..
80%
100%
Unsatisfactory PT
same analyte in 2 consecutive
OR
2 out of 3 testing events
Alternate/Split sample testing can be done for PT if…
approved PT isn’t available
SPLIT SAMPLES w/other or ref lab, established in house method, clinical validation by chart review, participation in ungraded/educational PT program
Examples of pre analytical testing
lab req, id, collection, storage, transportation, specimen adequacy, aliquoting, centrifugation
Oral requests can be made if…
and within…
followed by written authorization
within 30 days
Standard that requires the use of at least 2 pt ids…
3 examples of ids
Joint Commision
National Patient Safety Standard
-name, bday, med rec
How long keep records of test reqs/authorizations (can be patients chart/medical record)…
Who may request records…
2 yrs
HHS
Examples of analytical testing
reagents, calibration, QC, temps
recording results
verify normal range
competency of personell
Process of testing and adjusting an instrument/kit to provide a known relationship between the measurement response and the value of the substance being measured by the test
Contains a known amount of analyte being tested
used to establish a correlation between the measurement response and the concentration or amount of the substance that is being measured by the test procedure.
calibration
Records of patient testing kept for at least…
BB records kept for…
Blood/products…
Pathology kept for..
-PT 2yrs
-BB 5yrs
-Blood/products: 5yrs or 6mths after exp which ever is later
-path 10yrs
How long must a copy of each procedure w/dates and initial use/discontinuance be kept
2 yrs after discontinuence
Post analytic examples
verifying calculations
reporting results
ID/notify panic
filing
data retrieval
Most errors occur in what two phases…
pre and post
percentage of error:
pre…
analytical..
post…
pre 46%
analytical 8%
post 47%
Term used to describe monitoring/evaluating all aspects of testing and all phases.
Uses the QC data and conducted over a period of time
QA
Term that is one component of QA, involves mostly the analytical phase, ensures accuracy, and performed daily
QC
standard that where concentration is determined by dissolving weighted amt of std in solvent and diluting to a stated volume/mass.
Accuracy based on purity of std/solvent not analytical method.
primary calibration std
Standard where concentration is determined by an analytical method of stated reliability.
Prepared from pure substances of known composition.
Secondary std
Process that sets the instrument to a specific parameter, also called standards
calibration
Substances that are patient like used to validate run after calibration and tests the accuracy and precision of the method
Can use sera/BF thats stable for at least…
controls
a year
Control reqs
should be pt like
run at lease 2 levels
stable
never used to calibrate
Term that is the agreement between the measured quanitity and its true value
How close the value is to the true value
accuracy
Material prepared/purchased w/stated or expected value
assay control
Material whose value is not known except when assayed w/in lab by repeated testing
unassayed control
Aggrement among replicate measurements. How close the single values are to one another. The repeatability or reproducibility
precision
The more precise the method, the…the SD among replicate results
smaller
Actual middle value
median
value that occurs the greatest frequency
mode
average of all values, included in control material, represented by /x
mean
dispersion of control values about the mean.
repeatability, reproducibility, precision
SD
If data have a normal distrubution,
the mean/mode/median are…
about the same
Difference between highest and lowest values
range
average squared distance of data points from the mean
variance
square root of the variance
SD
SD expressed as percentage of the mean
CV
coefficient of variation
CV formula….
acceptable CV is less than…% for most analytical systems
SD/mean x 100
1SD
…% will fall to the right and left of the mean, so…% of all data fall within 1SD
34.1% fall to right and left
68.2% of all data fall within 1SD
2SD
…% of all data will fall between 2 SD
95.5% of all data fall within 2SD
3SD
…% of all data will fall within 3SD
99.6% of all data fall within 3SD
The lab normally runs within …or…% confidence limit to be considered accurate and precise
2SD, 95%
A chart with a normal distrubution curve on its side. Used to determine if a run is acceptable/quality of run.
Values within…on each side are accepted as being accurate and precise
Accurate test results fall w/in acceptable limits of +/-…SDs….% of the time
Levey Jennings chart
2SD
Signal of errors
…consecutive results fall on…side of mean
…consecutive results fall outside…
…result falls outside….
5 consecutive results fall on 1 side of mean
2 consecutive results fall outside 2SD
1 result falls outside 3SD
6 steps in finding source of signal errors
- clerical
- reagent
- procedural/maintainence
- retest ctrl
- recalibrate instrument/new ctrl
- call tech
Error thats unpredicable, no obvious pattern and almost always preventable.
Large deviation from mean.
Random error
3 Random error causes…
Remedy…
operator error (pipetting etc)
electronic fluctuation in instrument
interfering substances
Remedy: repeat test with fresh reagents, good working pipettes
Error that happens over a period of time, data points are not evenly distributed about the mean.
This can be described as…or….
Systemetic error
shift or trends
Error where data pts gradually drift from the mean.
Gradual loss of reliability.
When seven points in a row in an upward or downward direction are seen on a quality control graph
trend
Error with abrubt change in data pts from mean.
Shift
2 causes of trend
-deterioration/aging of reagents, ctrl, light
-accumulation of debris cuvette window
4 causes of shift
-change in reagent lot/without calibration
-failure of calibration
-instrument maintence
-change in room temp
Set of rules/decision criteria to decided whether an analytical run is in control or out of control..
Westgard Multirules
A…is an interval w/in which the accuracy and precision of testing system are expected to be stable but cannot be greater than 24hrs or less the frequency stated by m2anufacturer.
run
Multirule where you accept the run/is a warning
1 ctrl exceeds mean by +/-2SD
1-2S
Multirule where you reject, 1 ctrl exceeds mean by +/-3SD
1-3S
Rule where you rejct, 2 consecutive exceeds mean by +-2SD.
May be beginning of systemic error
2-2S
Rule where you reject, two consecutive is greater than +/- 4SD
May be due to random error
R-4S
Rule where you reject, 4 consecutive exceed by +/-1SD in the same direction.
May be systematic error
4-1S
Rule where you reject, 10 consecutive exceed in same direction.
May be systematic
10x
Normal range, normal value, ref range also called…
Refer to a normal grp of individuals free from disease and represent…% of the population
reference interval
95%
If no existing analyze or methodology exists to do comparative studies, need ….to… people
If method already in place, ref interval is validated by using method comparision.
Most common ref interval study used in lab is as few as…test subjects
120-700
40
Parameters categorized as sensitivity, specificity and predicitive value are broadly defined as…
diagnostic efficiency
A predicitive value of a methods ability to detect patients with a disease is called the…
Probability of correctly classifying diseased patient as disease
sensitivity of a test
the test that has 100% sensitivity can detect the disease in question in every patient who has the disease is called
true positive
Diagnostic sensitivity formulas
diseased w/+ result/total diseased x100%
or
true pos/# true pos + # false neg x 100%
The abilty to predict the value of a method to exclude a patient without disease is called…
Correctly classifying a nondiseased person as nondiseased
specificity
The test that has 100% specificity will always be negative, and a patient who tests negative does not have the disease
true negative rate
Diagnositic specificity formulas
nondiseased w/neg result/
total #nondiseased x 100%
or
true neg/# true neg + # false pos x100%
positive predictive value formula…
% of the time a positive test will be true
true pos/#true pos +#false pos x100%
negative predictive value formula…
% of the time a negative test will be true
true neg/#true neg+#false neg x100%
Differences between repeated and successive test results…
delta check
Delta check can be usesd as a form of …
quality assurance
4 parameters delta checks can be based on…
-current result minus previous
-current-previousx100%/previous
-delta diff/delta time
-delta % change/delta time
Any test performed at the time a rapid decision can be made that leads to treatment w/immediate pt outcome
POCT
point of care testing
What category of testing involves microscopic evaluation (i.e., wet mount, Potassium hydroxide preparation, fern test, etc.) by a physician in the office for their own patient?
To meet the criteria for inclusion in the Provider-Performed Microscopy (PPM) category, procedures must follow these specifications: The examination must be personally performed by the practitioner (defined as a physician), a midlevel practitioner (defined as a physician, a midlevel practitioner under the supervision of a physician), or a dentist. The procedure must be categorized as moderately complex. The primary test instrument is the microscope (limited to brightfield or phase-contrast microscopy). The specimen is labile. Control materials are not available. Specimen handling is limited. Proficiency testing is not required; however, twice-yearly verification of accuracy is required. Those with a PPM certificate can also perform waived testing.