Amino acids, proteins and enzymes Flashcards
Precursors of catecholamins
Phenylalanine and tyrosine
Precursors of serotonin and niacin
Tryptophan
Maple syrup urine disease related amino acids
Valine, leucine, and isoleucine
Sites for O-linked glycosylation of proteins
Serine and threonine. Golgi
Site for N-linked glycosylation of proteins
Asparagine. RE
Nonpolar, Aliphatic Side Chains 6
Gly, ala, val, leu, Ile, Pro (GAVLIP)
Aromatic Side Chains 3
Phe, Tyr, Trp
Positively Charged R Groups 3
Lys, Arg, His (LAH)
Negatively Charged R Groups 2
Asp, Glu
Polar, Uncharged R Groups 6
Ser, Thr, Cys, Met, Asn, Gln (MAGSCT)
Protein breakdown places
Lysosomal proteases, proteasomes.
Essencial amino acids 10
Arginine* Methionine Histidine Phenylalanine Isoleucine Threonine Leucine Tryptophan Lysine Valine (PHITMALTVL)
Negative nitrogen balance 5
Kwashiokor, dieatary deficiency, starvation, uncontrolled diebetes, infection
Positive nitrogen balance 3
Growth, pregnacy, convalescence
Convalescence
Recovery phase of injury or surgery
∆G <0
thermodynamically spontaneous
∆G >0
thermodynamically nonspontaneous
∆G = 0
reaction at equilibrium
∆G‡
energy of activation
Michaelis-Menten Equation
V = Vmax [S] / Km + [S] and Vmax = k2 [E]
Marasmus
Chronic deficiency of calories
Competitive inhibitor
Increase of Km. Vmax no effect.
Noncompetitive inhibitor
No effect of Km. Vmax decrease.
Statin mechanism
Competitively inhibit 3-hydroxy-3-
methylglutaryl coenzyme A (HMG CoA)
reductase in cholesterol biosynthesis.
Methotrexate mechanism
Competitively inhibits dihydrofolate reductase, depriving the cell of active folate needed for purine and deoxythymidine synthesis, thus interfering with DNA replication during S phase.
Allopurinol mechanism
Noncompetitively inhibits xanthine
oxidase.
Methanol poisoning treatment
Methanol poisoning (wood alcohol poisoning) is treated with ethanol administration. Both are substrates for alcohol dehydrogenase (ADH), with ethanol having a much lower Km for the enzyme compared with methanol. This prevents methanol from being converted to formaldehyde, which is toxic and not metabolized further.