Amino Acids Flashcards
How many amino acids are there?
20
Peptide bond
A bond between an amino group ( n terminus) and a carboxyl group ( c terminus)
Disulphide bond
A bond between sulphur groups that is usually formed following an oxidation reaction.
G(gln)
Glutamine
G(gly)
Glycine
V(Val)
Valine
Phosphomimetic
Amino acids that mimic phosphorylated amino acids when activated. This is seen in glutamate and aspartate, the activated forms of glutamine and asparagine respectively.
Chiral
When there are 4 different structures bound to an alpha protein.
Non-polar amino acids
Any amino acid that has an overall equal charge
Which types of amino acids can undergo phosphorylation
Amino acids with and OH group in their side chain
Side chain
Makes the amino acid unique and determines the property of the amino acids.
List 5 types of amino acids
Aromatic Neutral Acidic Basic Alkyl
T/F
All amino acids have a carboxyl group
True
C(cys)
Cysteine
H(his)
Histidine
N(asn)
Asparagine
M(met)
Methionine
W(trp)
Tryptophan
T/F
All amino acids are hydrophobic
False.
Only non-polar amino acids are hydrophobic. Polar amino acids like to interact with other polar molecules and are therefore hydrophilic.
T/F
Histidine has an overall positive charge
False
Histidine is a base, but it is an exception to the rule as it has neutral charges.
Anion
Negatively charged atom
Cation
Positively charged atom
Phosphatase
A component involved in dephosphorylation
T/F
Carboxylic acids are hydrogen accepting
False
Carboxylic acids are hydrogen donating, while nitrogens are hydrogen accepting.
L/D amino acid
Shows the side on the Fisher projection where the amino group is located. E.g L amino acid means there is an amino group on the left side of the amino group.
Why are di-sulphide bonds relevant in proteins?
Disulphide bonds are important for the strength and integrity of proteins and this process is commonly seen with tertiary and quaternary proteins. One such example is the transition from cysteine to cystine, which requires the removal of a hydrogen atom in exchange for a bond. This explains the rigidity in human hair.
T(thr)
Threonine
E(glu)
Glutamate
D(asp)
Aspartate
K(Lys)
Lysine
S(ser)
Serine
P(pro)
Proline
I(ile)
Isoleucine
A(alu)
Alanine
F(phe)
Phenylalanine
R(arg)
Arginine
L(leu)
Leucine