amine and amino acids Flashcards

1
Q

What are the uses of amines?

A

amphetamine - stimulant

putrescine - found in decaying meat

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2
Q

Why are amines basic and nucleophilic?

A

amines are basic and nucleophilic because they have a lone pair

  • can donate a pair of electrons
  • are attracted to positive charge
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3
Q

Why is aniline a weaker base than aliphatic amines?

A

reluctantly accepts the proton
readily reverses back to become deprotonated
- loses resonance stabilisation upon protonation = makes it less stable and more reactive

shown by resonance stabilisation lone pair in the p orbital is in conjugation with the benzene ring
- electron withdrawal of the adjacent benzene ring makes the lone pair less readily available to act as a base = donate pair of electrons

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4
Q

Why type of reaction can amines go under?

A

substitution reaction = Sn2

- acts as a nucleophile and base

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5
Q

What are alkaloids?

A

nitrogen containing compounds of low molecular weight

- produce physiological responses

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6
Q

What are the uses of alkaloids?

A

pain relief
- opioids = narcotics that act on opiod receptors, contain morphine which is then processed chemically into heroin

kill animals
- coniine = poison found in hemlock, causes paralysis and asphyxia

atropine
- treats damage caused by nerve agents

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7
Q

How do epoxides react with bases and weak nucleophiles?

A

epoxides react with bases and weak nucleophiles at the least hindered carbon
- carbon atom with the smallest number of attached constituents

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8
Q

How do epoxides react under basic conditions? What are the requirements for the reaction?

A

epoxides react at the least hindered carbon and form alcohols

requirements

  • NaOH
  • water
  • reflux
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9
Q

Which amino acids’ alpha carbon is not chiral?

Which amino acid does not have a S configuration?

A

all amino acids have a chiral alpha carbon except for glycine
- the R group is a H atom

all amino acids have an S configuration except for cysteine
- cysteine has an R configuration

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10
Q

What do the dash and dotted lines mean in structures?

A

dashed line
- towards you
- should have the highest priority group = highest molecular weight
dotted line
- away from you
- should have the lowest priority group = lowest molecular weight

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11
Q

In what form do the amino acids exist in?

A

amino acids exist as zwiterrion

  • they are not acidic or basic
  • they can never exist an uncharged compound
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12
Q

What is the isoelectric point?

A

pI = pH

  • the isoelectric point is the point at which there is no charge = zwitterion
  • positive charge is equal to the negative charge
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13
Q

What is Strecker synthesis?

A

synthesis of amino acids from an aldehyde

- using ammonium chloride and sodium cyanide

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14
Q

What are the requirements for Strecker synthesis?

A

ammonium chloride and sodium cyanide = generate reactants

  • ammonia
  • hydrogen cyanide

concentrated acid and water is needed for the final step to convert the nitrile group into carboxylic acid
- hydrolysis of nitrile

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15
Q

What are peptide bonds? How are they formed and written?

A

peptide bonds

  • amide bonds that link amino acids
  • formed by condensation reaction between amino acids = water loss

peptides are written with peptide bonds. they position the amine group to the left and the carboxylic acid group to the right

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16
Q

How do you work out the possible sequences of a protein?

A

number of possible sequences for a protein chain
= 20 ^ n
n - amino acid residues

17
Q

What are the properties of amides?

A

all amides are high melting point solids
all are soluble in water except for benzamide

unreactive = inert

18
Q

Why are amides unreactive?

A

resonance structures stabilise it and make amides unreactive

- stabilised via the delocalisation of p electrons

19
Q

What are the features of a peptide bond?

A

inert = not reactive

planar to allow delocalisation
- resonance structures

restricted rotation around the amide bond
- have double bond character = 40%

rotation of groups attached to the amide is relatively free
- single bonds can rotate