9 - Signalling via Calcium - Williamson Flashcards

1
Q

explain why Ca is unusual as a signalling molecules

A
  • 2nd messenger
  • behaves as a binary signal, on/off. strange for 2nd messengers because normally strength of signal proportional to amount of 2nd messenger. not with calcium, high amounts of Ca = ON and low amounts = OFF. no in between
  • Ca is not made/degraded it is stored in ER/outside of the cell and moved in
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2
Q

state the resting intracellular and extracellular [Ca2+] and state what the intracellular [Ca] rises to upon receiving signal

A

intracellular; < 10^-7 M
extra; 10^-3 M
rises to around 10^-6 (factor of 10)

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3
Q

how do cells work to [Ca2+] low inside cells?

A
  • Ca pumps pump OUT Ca from the cytoplasm and into the ER)
  • Ca channels regulated by signals

(need some mechanism of recognising a rise in intracellular [Ca])

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4
Q

why is it good that there is a large difference in Ca conc between the inside and outside of a cell?

A
  • because the gates do not need to be open for v long to see a change in [Ca]
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5
Q

describe the differences in Na and K conc inside and outside of the cell and state how much ATP is used to maintain these gradients in various cells

A
  • Na is 10-30x lower inside cells than out
  • K is 10-30x higher inside cells than out
  • around 25% of ATP in eukaryotic cells required to maintain this gradient (around 65% in neurons)
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6
Q

how does the comparison of Na and K conc inside / outside the cells compare to Ca2+ conc difference inside & outside the cells?

A

Ca2+ conc is typically 10,000 times lower inside than out of the cells. shows how much harder the cell has to work to keep this gradient

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7
Q

describe the 2 main types of Ca pump

A

1) ATP - P-type Ca2+ ATPase
- pumps out one Ca for 1/2ATPs
- found in all eukaryotic cells
- eg sarcoplasmic reticulum in muscle stores Ca to stimulate muscle contraction. around 90% of membrane protein here is P-type ATPase . allows for Ca conc to be reset within 30ms

2) Na gradient utilised
- one Ca out; 3Na in
- one Ca + 1 K out; 4 Na in (works even harder!)
this is found in cells that do lots of signalling eg muscle, nerve cells

extra pumps that pump Ca into the ER

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8
Q

name the 2 signals that allow Ca gates to be opened

A
  • GPCR activation eventually leading to IP3 production and binding to IP3 gated channels
  • membrane depolarisation
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9
Q

how does the activation of a GPCR lead to Ca release from intracellular stores? what is the result of this ca release?

A
  • activated GPCR -> activates Gqa -> activates PLCy
  • cleaves PIP2 in membrane to release soluble IP3
  • IP3 binds to IP3 gated ion channels on ER leading to release of Ca2+ to the cytoplasm due to the Ca gradient
  • Ca2+ then binds and activates PKC -> cellular effects eg P and activation of metabolic enzymes and TFs
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10
Q

what is the long name for IP3

A

inositol 1,4,5-triP

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11
Q

what is an additional function of IP3

A

fertilisation of the egg by the sperm

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12
Q

describe cell membrane depolarisation and how it leads to an influx of Ca2+ . draw a diagram of this

A
  • eg action potential passing along plasma membrane eg in muscle cell
  • membrane depolarisation causes opening of Ca2+ channels, influx of Ca2+ (Ca2+ channels present in T-tubule membrane)
  • influx of Ca2+ through T tubule allows activation of ryanodine R when Ca binds. causes opening and release of more Ca from intracellular stores eg from Sarcoplasmic reticulum in muscle cells
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13
Q

overall, state the 2 main ways in which Ca2+ can be release into the cell

A
  • depolarisation leading to activation of voltage-gated Ca channel
  • activation of Ryanodine receptor leading to release of intracellular stores of Ca
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14
Q

what is positive feedback in terms of Ca channels. what is positive feedback responsible for?

A

some Ca channels activated by Ca itself providing amplification through positive feedback eg ryanodine receptors
- responsible for the waves and oscillations seen inside cells that can travel further than simple changes in Ca conc would

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15
Q

Ca conc are not the ____ across the cell - there are large _____

A

same

gradients

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16
Q

how can Ca gradients be made in the cell?

A

proteins in the cytoplasm act as Ca buffers that mop up Ca - related to calmodulin

17
Q

what happens to calcium conc as vasopressin conc increases in the liver? why does this happen?

A

Ca oscillations in the liver become more frequent. vasopressin = Ca buffer therefore allowing more changes in Ca when Ca gated channels are activated therefore releasing > Ca

18
Q

give the overall common mechanism that is used to recognise a change in cellular ion conc

A

binding of Ca to another protein causing a conformational change which can then be recognised by an additional system

19
Q

give the specific mechanisms that is used to recognise change in intracellular Ca levels. draw a diagram of the structure that is used to recognise this change

A
  • binding of Ca to CaM
  • CaM structure has 2 folded lobes that can both bind 2 Ca
  • 4 EF hands that can each bind 1 Ca2+
  • binding to Ca exposes hydrophobic surfaces (esp Met) folds up around additional helices of a protein eg binds to myosin light chain kinase (smooth muscle contraction)
20
Q

what is Ca binding to CaM an example of and why

A

cooperative binding
binding of 1 Ca makes the binding of another easier. makes the signal much more binary and gives a sharper transition between ON/OFF

21
Q

give some targets of Ca-bound CaM

A

Ca/CaM-dependent kinases, phosphodiesterases, NO synthase

22
Q

describe how CaM kinase II is activated and state where it is found. draw a diagram of this process

A

found in the brain

  • in inactive form, the inhibitory domain bound to catalytic domain
  • binding of Ca2+/CaM allows the middle helix of CaM to bind the inhibitory domain releasing the catalytic domain
  • catalytic domain is now active and can autoP itself @ a different site on the enzyme (using ATP)
  • once [Ca2+] decreases Ca released from CaM and CaM dissociates however the kinase still remains P and active
  • prolongs the signal, may be invovled in learning
  • (Ca2+ independent)
  • phosphatases required to remove P, kinase = inhibited once inhibitory and catalytic domains interact again
23
Q

describe another common mechanism that results from Ca binding and give specific examples of this

A
  • Ca binding causes relocation to the membrane
    eg Bacterial toxin;
  • C2 domain and when Ca binds it relocates back to the membrane
    eg Protein Kinase c
  • Ca can bind to the C2 domain of PKC. causes it to stick to the membrane, aided by DAG