6.1.1 Cellular Control Flashcards

1
Q

How can mutations occur?

A

Insertion, deletion or substitution of one or more nucleotides on a DNA sequence

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2
Q

What are the possible effects of gene mutations?

A

Neutral
Beneficial
Harmful
Impact whether protein is produced on not

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3
Q

Why do some mutations have a neutral effect?

A
  1. The mutation changes a base in a triplet, but aa that the triplet codes for does not change - DEGENERATE CODE
  2. The mutation produces a triplet that codes for a similar aa, but the aa is chemically similar to original so function is similar to original aa
  3. The mutated triplet codes for an aa not involved with the protein’s function (e.g. if the affected amino acid is
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4
Q

How do mutations specifically impact proteins?

A

They can make a protein more or less active by changing the primary structure of the protein if the mutated triplet code no longer codes for the same aa thus the tertiary structure may also change as the proteins fold in a different manner thus the protein does not function properly
E.g. active sites of enzymes may be affected and thus substrates will no longer be able to bind to the active sites

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5
Q

Which type of mutation is most likely to cause a neutral effect?

A

Substitution

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6
Q

How can mutations be beneficial and give an example?

A

The mutation can have an advantageous effect on am organism - possibly can ↑ organisms chances of survival
E.g. some bacterial enzymes break down certain antibiotics and mutations in those genes that code for these enzymes could make them work on wider range of antibiotics, making the bacteria antibiotic resistant + thus helping them survive
Mutations that are beneficial to organism are passed onto future generations by process of natural selection

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7
Q

How does beneficial mutation and natural selection work in tandem?

A
  1. There is a mutation causing an advantageous trait in an organism
  2. As the gene is favourable to the organism’s survival, it survives selection pressure (cold winter), whereas non-mutated organism are more likely to die
  3. Genes with mutations go on to reproduce and process continues where most mutated organisms survive to reproductive age and pass on advantageous allele to their offspring
  4. Frequency of mutated allele increases from generation to generation
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8
Q

How can mutations be harmful and give an example?

A

The mutation has a disadvantageous effect on an organism - can ↓ their chances of survival
E.g. 1 -cystic fibrosis is caused by deletion of 3 bases in gene that codes for CFTR protein, thus the mutated CFTR protein folds incorrectly and so is broken down - leads to excess mucus production which affects lungs of CF sufferers
E.g. 2- certain mutation in BRCA1 gene can ↑ risk of breast cancer- the gene produces a protein that helps repair breaks in DNA, but mutations in BRCA1 gene itself can result in a very short protein that cannot do its job and thus may lead to uncontrolled cell division + development of cancer

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9
Q

How do mutations impact whether or not a protein is produced with an example?

A

If a mutation occurs at the start of gene and so prevents RNA polymerase from binding to start of gene then transcription cannot occur so protein coded for by gene will not be made- can have harmful impacts such as genetic disorders
E.g. HBB gene codes for beta-globin protein, a component of haemoglobin but the genetic disorder beta thalassaemia can be caused by mutation in region of HBB gene where transcription is initiated - mutation here leads to little or no production of beta-globin thus leads to ↓ levels of haemoglobin thus RBC development is disrupted + less O2 can be transported to somatic cells

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10
Q

What is a frameshift mutation?

A

Adding or deleting a base changes the number of bases present thus causing a shift in all base triplets that follow - an insertion or deletion causes the rest of the base sequence to be read differently
The earlier a frameshift mutation appears in the base sequence, the more aa affected + the greater the mutation’s effect on the protein
BUT if the n.o. of bases added is a multiple of 3 then a FS mutation won’t occur as the triplets that follow will still be read correctly

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11
Q

What can ↑ the rate of mutations?

A

MUTAGENS
physical- ionising radiation such as x-rays
chemical- deaminating agents
biological- viruses + alkylating agents

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12
Q

What are the 3 regulatory mechanisms for gene expression?

A

TRANSCRIPTIONAL,
POST-TRANSCRIPTIONAL
POST-TRANSLATIONAL

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13
Q

Explain transcriptional control in eukaryotes?

A

Gene expression can be controlled by altering the rate of transcription of genes, ↑ transcription means more RNA which can be used to make more protein, this process is controlled by transcription factors which bind to specific DNA sites near the start of their target gene - the genes they control the expression of + then RNA polymerase binds to them

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14
Q

Explain post-transcriptional control in eukaryotes and prokaryotes

A

Eukaryotes - after transcription, mRNA is edited as genes contain introns, during transcription both introns and exons are transcribed into mRNA which is called PRIMARY mRNA TRANSCRIPTS or pre-mRNA
Introns are then removed by process called splicing - introns removed + exons joined together to form MATURE mRNA strands, which takes place in nucleus
Prokaryotes - mRNA is produced directly from DNA, without splicing as there are no introns in prokaryotic DNA

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15
Q

Explain post-translational control and give an example

A

Some proteins are not functional straight after translation + need to be activated - which is controlled by molecules like hormones + sugars - some molecules (primary messenger/control molecule) bind to CSM receptors + then trigger the production of cyclic AMP (secondary messenger) which relays message to inside of cell
cAMP is cyclic adenosine monophosphate which alters a proteins 3D structure like an enzyme’s active site making it more or less active
E.g. activation of protein kinase A (PKA) by cAMP, where PKA is an enzyme made of 4 subunits when bound together are inactive - when cAMP binds, it causes a change in its 3D structure, releasing the active sub-units thus PKA is now active

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16
Q

What is a transcription factor?

A

proteins that bind to DNA + switch genes on or off by ↑or ↓ the rate of transcription - factors that start transcription are activators + those that stop transcription are repressors

17
Q

What is an operon?

A

a section of DNA that contains a cluster of structural genes that are all transcribed together + control elements + sometimes regulatory gene

18
Q

What is a promoter?

A

A type of control element (DNA sequence) where RNA polymerase binds to

19
Q

What is an operator?

A

A control element (DNA sequence) that transcription factors bind to

20
Q

What is a regulatory gene?

A

Codes for the activator or repressor (transcription factors)

21
Q

What is an Intron?

A

Sections of gene that DO NOT code for aa

22
Q

What is an Exon?

A

Sections of gene that DO code for aa

23
Q

What is a body plan?

A

The general structure of an organism

24
Q

What are Hox genes and are they similar in various animals?

A

Genes that code for proteins that control the development of body plans - they are found in animals, plants + fungi - therefore scientists can use Drosophila flies as ‘model organisms’ to see how genes control development and then apply findings to humans

25
Q

What is a homeobox sequence and how are they highly conserved?

A

They are regions on the hox genes which code for a part of a protein called the homeodomain (acts a as a transcription factor). The proteins bind to DNA at start of developmental genes, activating or repressing transcription of the body plan
They are highly conserved in the sense that these sequences have changed very little during evolution of diff. organisms that possess these HB sequences

26
Q

What is mitosis?

A

part of cell cycle where 1 cell divides to form 2 identical daughter cells.

27
Q

What is apoptosis?

A

programmed cell death

28
Q

How does Apoptosis occur?

A
  1. enzymes inside the cell break down cell components e.g. proteins + DNA
  2. the cells shrink + begin to fragment
  3. phagocytes engulf + digest the cell fragments
    the CSM of an apoptotic cell forms blebs (round blobs)
29
Q

What is the role of apoptosis and mitosis in development?

A

Mitosis - differentiates + creates bulk of body parts

Apoptosis - refines the parts by removing unwanted structures

30
Q

Give 3 examples of the control of development via mitosis + apoptosis?

A
  1. when hands + feet first develop in humans, the digits (fingers + toes) are connected and are only separated when cells in connecting tissue undergo apoptosis
  2. As tadpoles develop into frigs, their tail cells are removed via apoptosis
  3. An excess of nerve cells are produced during the development of the nerve system so nerve cells that are not needed undergo apoptosis
31
Q

How do the genes that regulate the cell cycle + apoptosis respond to internal and external stimuli?

A

Internal - stimulus could be DNA damage - if DNA damage is detected during the cell cycle, this can result in the expression of genes which can cause the cycle to be paused + can even trigger apoptosis
External - such as a stress caused by lack of nutrient availability, could result in gene expression that prevents cells from undergoing mitosis - gene expression which leads to apoptosis being triggered can also be caused by an external stimulus such as an attack by a pathogen