5 - Pilus Biogenesis Flashcards

1
Q

Why is pilus research of particular interest to medical science?

A

Bacteria such as E. coli rely on them for recognition and attachment to their target membrane.

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2
Q

Why is the type 1 pilus particularly important to investigate?

A

It is used by bacteria to attach themselves to the bladder where they cause UTIs.

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3
Q

Which bacterial pilus is used to attach to the kidney epithelium?

A

The P-pilus.

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4
Q

What is the general structure of a pilus?

A

A long inflexible pilus rod with a shorter, thinner and more flexible fibrillum tip that is responsible for recognition and binding.

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5
Q

What does the pap gene cluster encode?

A

The P pilus.

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6
Q

What subunits make up the pilus rod and fibrillum of the P pilus?

A

Pilus rod comprised entirely of papA.

Fibrillum made up of a variety of subunits, mostly papE but also K, F and G.

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7
Q

What role do papK and papF play?

A

They are the major adaptor proteins of the P pilus fibrillum.

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8
Q

What is the larger structure of the pilus subunits?

A

They are all similar to an immunoglobulin fold, but missing the C-terminal ß-strand (G-strand) that produces a groove in the superstructure.

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9
Q

How do the pilus subunits bind to each other?

A

Each one possesses an N-terminal sequence that can bind into the groove of the one before it by donating a beta strand to produce a full immunoglobulin fold.

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10
Q

What is the name of the way in which a pilin subunit recruits the next subunit by binding it into its groove?

A

ß-strand complementation.

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11
Q

What role does PapG play?

A

Forms the very tip of the fibrillum, containing a special binding domain on its extra immunoglobulin fold.

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12
Q

How are the pilus subunits transported into the periplasmic space?

A

After translation they are transported unfolded to the perplasmic membrane where they are recognised by the YEG transporter, which translocates them into the periplasmic space.

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13
Q

What occurs to the pap subunits when they reach the periplasmic space?

A

They fold into their immunoglobulin form, aided by a Periplasmic Disulphide Isomerase called DsbA. They are then bound by a molecular chaperone: papD.

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14
Q

What is the role of papC?

A

It is the usher protein that assembles the pilus out of the outer cell wall.

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15
Q

How is pilus formation initiated?

A

PapD binds to papG, being sandwiched between its immunoglobulin folds in such a way that the extra one enters the papC usher. The second papG domain then recruits the next subunit, F.

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16
Q

How do the subunits ensure that they are added sequentially?

A

The empty groove on the first subunit is specific to the N-terminal ß donation sequence on the next protein that needs to bind.

17
Q

What is the proper order of subunits in the fibrillum?

A

GFEEEK, from tip to rod.

18
Q

What form does the papA take as it is pushed out of the usher by new ones binding?

A

It coils up into the thick and inflexible pilus rod.

19
Q

What is known about the structure of the papC usher?

A

Very little, only the N terminal subunit recognition domains have had their structure solved.

20
Q

What is the usher protein in the type I pilus system?

A

The FimD protein.

21
Q

How does FimD differ from papC?

A

The subunit recognition domains are the N-terminal ones in papC and C-terminal in FimD.

22
Q

What is the two-domain fibrillum tip subunit in the Type I pilus?

A

FimH

23
Q

What is the molecular chaperone used in the Type I pilus?

A

FimC

24
Q

How do the molcular chaperones bind to the subunits?

A

Through ß-strand donation into their groove.

25
Q

How does the FimD usher add new subunits?

A

Two recognition domains, one hold the first subunit in place with its chaperone still bound in its groove. The next subunit is recognised by the second domain that binds it and positions it so that its N-terminal sequence cane displace the first subunit’s chaperone and donate its own strand, thus joining them.

26
Q

How does pilus construction end?

A

When a sufficient length has been produced a terminator subunit binds whose chaperone cannot be displaced.

27
Q

Why is pilus biogenesis a good target for antibiotics?

A

Only removes virulence factor of pathogen, limited effect on natural microbe flora.
Bacteria are slower to develop resistance as the selection pressure is less direct.

28
Q

Why are depilating antibiotics (pillicides) effective?

A

Because without the pilus the bacteria are unable to bind to and enter cells nor produce a biofilm. This allows the immune system to easily flush them out.

29
Q

Describe the action of one example of a Pillicide.

A

Np048 reduced bacterial adherence and biofilm presence by targeting the donor strand exchange subunit recruitment.