3.8.2 Gene Expression Flashcards

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1
Q

What are stem cells?

A
  • undifferentiated cells
  • that can specialise into other cell types
  • can continually divide by mitosis
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2
Q

What makes a cell specialised? (1 mark)

A
  • different genes switched on or off
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3
Q

What is a totipotent cell?

A
  • can become any type of cell
  • any body cell type AND extra-embryonic or placental cells
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4
Q

What is a pluripotent cell?

A
  • can become any body cell type
  • so can make entire organism (eg late embryonic and fetal stem cells)
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5
Q

What is a multipotent cell?

A
  • more differentiated
  • can become more than 1 cell type eg adult stem cells
  • but not any cell
  • eg hematopoetic stem cells in bone marrow
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6
Q

What is a unipotent cell?

A
  • specialised - can only become one cell type
  • eg cardiomyocyte
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7
Q

How are induced pluripotent stem cells produced?

A
  • can be produced from unipotent cells (fully differetiated)
  • unipotent cells genetically altered in a lab to become pluripotent
  • involves adding protein transcription factors to switch on genes
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8
Q

What makes a cell specialise? (Longer answer)

A
  • proteins called transcription factors
  • attach to a promoter region of the DNA
  • the RNA polymerase enzyme can now bind
  • forming a transcription initiation complex
  • transcription can now begin
  • transcription will only occur if all the transcription factors are present - how genes can be switched on
  • mRNA produced during transcription and translated into a polypeptide at ribosomes
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9
Q

What is a transcription factor?

A
  • protein that moves from cytoplasm to DNA
  • binds to a specific promoter
  • leads to pre-mRNA production by allowing binding of RNA polymerase to DNA
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10
Q

Advantages of treating a genetic disease with iPS

A
  • use of iPS cells is long term
  • less chance of rejection from immune response
  • just a single treatment
  • gene therapy can cause harmful side effects from using viruses
  • disadvantage: continually dividing cells may cause cancer
  • but low risk of cancer, cancer could be easily treatable
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11
Q

Role of oestrogen in initiating transcription

A
  • oestrogen diffuses through phospholipid bilayer
  • oestrogen binds to its receptor on the transcription factor
  • this changes the shape of the transcription factors, changing the shape of the DNA binding site
  • the transcription factor enters the nucleus via nuclear pores and binds to its complementary promoter site on DNA to stimulate transcription of the gene
  • (mRNA is produced and then translated at the ribosomes so the gene is expressed- switched on)
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12
Q

What type of hormone is oestrogen?

A

Steroid

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13
Q

Role of RNA interference in inhibition of translation

A
  • RNA dependent RNA polymerases (RDRs) produce double stranded (ds) RNA molecules from mRNA
  • an enzyme cuts the ds RNA into small sections - small interfering RNA (siRNA)
  • one of the two siRNA strands combines with a complex of molecules (RISC) which cuts the mRNA. Requires energy from ATP hydrolysis
  • siRNA guides RISC complex to any mRNA complementary to the RISC so that it can’t be translated into a protein. Gene isn’t expressed
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14
Q

What are the uses of siRNA

A
  • block disease causing genes and prevent disease
  • to identify the roles of genes in a biological pathway
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15
Q

What is epigenetics?

A
  • heritable changes in gene function caused by environmental factors
  • without changing the DNA base
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16
Q

Summary of methylation and acetylation

A
  • methylation mutes - gene off. Cytosines
  • acetylation activates - gene on. Histones
17
Q

Acetylation explanation

A
  • histones more negative
  • decreased attraction to DNA
  • DNA more losely packed/less condensed
  • DNA more accessible to transcription factors
  • transcription occurs - RNA polymerase binds
  • gene switched on
18
Q

De-acetylation of DNA

A
  • histones more positive
  • increased attraction to DNA
  • DNA more tightly packed/less condensed
  • DNA inaccessible to transcription factors
  • no transcription occurs
  • gene switched off
19
Q

Methylation of DNA nucleotides explanation

A
  • methyl group (CH3) added to cytosine
  • this makes DNA inaccessible to transcription factors
  • RNA polymerase can’t bind
  • gene switched off
20
Q

Un- methylated DNA explanation

A
  • DNA more accessible to transcription factors
  • RNA polymerase can bind
  • gene switched on
21
Q

How can methylation cause cancer?

A
  • Methylation of tumour suppressor gene
  • methylation prevents transcription of a gene
  • protein which prevents cell divison or causes cell death (apoptosis) is not produced
  • no control of cell division or mitosis
22
Q

Another mutation causes cancer

A
  • proteins not produced
  • cancer cells have faulty DNA
  • cells with faulty DNA divide
  • uncontrolled cell division produces cancer
23
Q

How can transcription factors be used to reprogram cells

A
  • attach to gene promoter region
  • stimulate/inhibit transcription