3. Proteins Flashcards
What is the structure of an amino acid?
Why are proteins complex compared to polysaccharides?
- Side groups on amino acids vary from one amino acid to the next
- A protein is made up of about 20 different amino acids, each with a different side group
- Polysaccharide is usually made up of the same repeating monosaccharide units or combo of a few different units
Which amino acids have carbon rich side chains making them HYDROPHOBIC?
Which amino acids are hydrophilic or polar and therefore interact well with water?
What pH’s do the charged amino acids interact at?
What is the primary structure of proteins?
The pimary structure of a protein is the linear sequence of amino acids as encoded by DNA
What are the two types of secondary structure that proteins have?
Alpha helices or beta sheets
How is the alpha helix stabilised?
How are beta sheets stabilised?
Beta sheets are formed when hydrogen bonds stabilize two or more adjacent strands
What is the tertiary structure of the protein?
Why are the charged amino acids important for structure in proteins such as ubiquitin?
How do membrane bound proteins make use of charged amino acids to inform their shape?
What are three factors the native structure of a protein depends on?
- Repulsive and attractive forces
- Interactions among the amino acid side groups of proteins
- The environment the protein is in.
Which levels of protein structure are disrupted when the protein is denatured?
- Protein denaturation refers to changes in the secondary and tertiary structure of the protein, while the primary structure remains unchanged.
What are some of the forces that stabilise protein structure?
- Hydrophobic interactions
- Electrostatic interactions
- Van der Waals interactions
- Hydrogen bonds
- Ionic interactions
- COvalent bonds or chemical cross links
- Disulfide bonds
What happens to a protein when it is denatured?
- Undergo physical and chemical changes
- Lose its biological activity
- Lose solubility
- Increase tendency to aggregate
What happens to an enzyme where it is denatured?
- Loss of enzyme activity
- Changes in reaction rate
- Changes in affinity for its substrate
- Changes to its optimum pH or temperature to funciton
In what ways is protein denaturation beneficial for food processing?
What are denaturants?
Factors that contribute to the changes in the environment surrounding the protein which result in disruption of interactions that stabilise the secondary and tertiary structure.