3. Gene Structure Expression and Regulation Flashcards

You may prefer our related Brainscape-certified flashcards:
1
Q

What is a gene?

A

A segment of DNA that codes for proteins

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What is the template strand?

A

Template strand of DNA contains the coded information of a particular gene, also called antisense or non coding strand.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What is the complementary strand?

A

The non template strand or the sense strand or the coding strand.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is the coding region?

A

The coding region is the part of a gene that contains coded information for making a protein. In eukaryotic cells it is not continuous.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What are introns and exons?

A

Introns are non coding regions of DNA and exons are coding regions of DNA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What is the central dogma of molecular genetics?

A

The idea that DNA makes proteins by way of an intermediate RNA. Information can only flow from DNA to proteins

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What is transcription?

A

It is the process of copying the genetic instructions present in the DNA to messenger RNA. Occurs in the nucleus of eukaryotic organisms and in the cytoplasm of prokaryotic organisms.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What are the steps in transcription?

A
  • the enzyme RNA polymerase binds to a specific base sequence of the DNA template strand of the promoter region of a gene to be transcribed,
  • the DNA unwinds and exposes the bases of the template strand,
  • the base sequence of the DNA template strand (3’ to 5’) guides the formation of a complementary copy of mRNA. Free complementary RNA nucleotides pair with DNA and are joined together one by one to form a chain of mRNA or premrna in eukaryotes.
  • the enzyme RNA polymerase catalysers this reaction adj copies the DNA until it reaches a stop signal, terminating RNA production
  • a single stranded molecule of mRNA or premrna results adm is complementary to the base sequence of the DNA strand
  • mRNA transcript or premrna is released and the double helix reforms.
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What happens in pre-mRNA processing in eukaryotes?

A
  • a methylated cap is added
  • a poly a tail is added
  • introns are spliced out
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What is translation?

A

Translation is the process of decoding the genetic instructions where the order of bases in the mRNA transcript is used to produce a specific polypeptide amino acid chain.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Where does translation occur?

A

Occurs in the cytoplasm at the ribosomes of both eukaryotic and prokaryotic organisms

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What is rRNA?

A

Produced in large quantities in the nucleus and stored there to form the nucleolus. rRNA moves from the nucleus to the cytoplasm when it is required to form part of ribosomes. Binds to proteins to make ribosomes.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What structures are required for translation?

A
  • mRNA carries the code from the DNA and contains codons.
  • tRNA is responsible for transporting amino acids to their correct position on the mRNA and contains anti codons.
  • ribosomes: provides the environment for tRNA attachment and amino acid linkage
  • pool of amino acids
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What are the steps in translation?

A
  • the mRNA carrying the code transcribed from DNA is transported from the nucleus through the nuclear pore to the ribosome in the cytoplasm.
  • the small ribosomal subunit bonds to the methylated cap on the mRNA and scans along the mRNA for an Aug. Once found, a large ribosomal subunit joins with the small one commencing translation when a start codon is translated.
  • a tRNA molecule with the complementary anti codon pairs momentarily with the mRNA releasing its amino acid.
  • as the ribosome moves along the mRNA more amino acids are added to the growing polypeptide chain and peptide bonds between adjacent amino acids form, catalysed by enzymes in the ribosomes.
  • when the ribosome reaches a stop codon protein synthesis stop and the polypeptide chain is released.
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What does the order of nucleotides determine?

A

The order of nucleotides in DNA determines the order of nucleotides in mRNA which determines the tRNA that will bind to the mRNA which in turn determines the order of the amino acids linked together to produce a protein.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What does alternative splicing of pre mRNA do?

A

Results in amino acid sequence of polypeptide chain being different, proteins having different secondary and tertiary structures and different functions.

17
Q

What are the differences between prokaryotic and eukaryotic DNA in terms of shape?

A

-in prokaryotes the main chromosome is a circular molecule of DNA and in eukaryotes it is a linear molecule of DNA

18
Q

How does prokaryotic and eukaryote DNA differ in terms of histones?

A

Prokaryotic DNA is naked

Eukaryotic DNA exists in complexes with proteins called histones

19
Q

How does P and e DNA differ in terms of nucleotide sequences?

A

Prokaryotic DNA comprises unique nucleotide sequences

Eukaryotic DNA comprises many repeated sequences

20
Q

How does prokaryotic DNA differ from e in terms of where it is in the cell?

A

P DNA is free within the cell

E DNA is enclosed within the membrane of the nucleus

21
Q

How does p and e DNA differ in terms of the coding sequences of genes?

A

P DNA has uninterrupted coding sequences of genes

In eukaryotic DNA exons are interrupted by introns

22
Q

How does p and e DNA differ in terms of plasmids?

A

As well as main chromosome, additional DNA in the form of plasmids is present in prokaryotes.
In eukaryotes plasmids are absent

23
Q

Processing of gene information in prokaryotic cells

A
  • As there is no nuclear envelope, mRNA can associate with ribosomes as the mRNA is being formed
  • mRNA is not interrupted because bacterial mRNA does not contain introns
  • translation of mRNA into proteins begins before transcription is complete
  • mRNA molecules often contain transcripts of several genes. By placing genes with related functions on the she, mRNA bacteria can synthesis these proteins in coordination
24
Q

Processing of gene information between prokaryotic and eukaryotic cells

A
  • because these cells possess a nucleus, the mRNA is formed completely and must cross the nuclear envelope before translation
  • before translation the mRNA is modified by the removal of introns and addition of methylated cap and poly a 3’ tail.
  • translation begins at the ribosomes in the cytoplasm
  • mRNA usually specifies a single protein
  • absence of operons
25
Q

What does expressing a gene mean?

A

Expressing a gene means it it transcribed and translated and a protein is produced

26
Q

What does gene expression depend on?

A

Type of cell
Stage of development
Conditions within and around the cell

27
Q

Why is gene regulation advantageous?

A

Results in proteins being produced in suitable amounts when required, conserves resources and energy

28
Q

Structural gene

A

Region on the DNA that codes for a particular protein (coding region). Proteins required for normal cell functioning

29
Q

Regulatory gene

A

Produce depressor proteins that control the action of other genes determining if they are switched on. F switched on control the rate at which proteins are made.

30
Q

Repressor protein

A

Coded by regulatory genes, inhibits the action of an operator thereby preventing transcription of a structural gene

31
Q

Operator gene

A

Lies between the promoter region and structural gene. Binding site for repressor protein

32
Q

Promoter region

A

Situated close to the structural gene and controls the start of the decoding process and the rate at which protein products are produced

33
Q

Homeotic gene

A

Control the embryonic development in insects and vertebrates. These master genes are an example of regulatory genes. These genes control the building of animal body parts and ensured that they are built in the correct locations.

34
Q

Operon

A

Operon is a group of genes that are under the control of a single operator site

35
Q

What does the lac operon consists of?

A

The lac operon consists of an operator (binding site for repressor protein), a promoter (binding site for RNA polymerase) and three genes that code for enzymes involved in lactose breakdown.
A repressor protein regulates the three genes by binding to the operator and inhibiting transcription

36
Q

What happens when lactose is present?

A

It binds to the repressor altering its shape so that it cannot bind to the operator. The three genes are transcribed

37
Q

If lactose is absent?

A

If it is absent or low the repressor protein can bind to the operator covering part of the promoter. This means that RNA polymerase cannot bind to the promoter and transcription of genes is blocked