3. Developmental Genetics Flashcards

1
Q

Define and discuss the basic classifications used in dysmorphology (objective)

A

Answer later

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2
Q

Discuss the basic principles of morphogenesisdevelopment (objective)

A

Answer later

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3
Q

Discuss broadly some of the clinical syndromes seen in human developmental biology, including the associated genes (objective)

A

Answer later

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7
Q

Congenital Anomalies (frequency)

A

Undescended testicles and heart defect most common

Cleft palate, craniosynostosis, syndactyly

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8
Q

Deformation

A

Unusual forces on normal tissue

Usually no inherent problem in the embryo/fetus/neonate

Mechanical forces result in altered morphogenesis, usually molding

Examples: uterine constraint, oligohydramnios, breech position, positional plagiocephaly

Recurrence risk is generally low

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9
Q

Disruption

A

Breakdown of normal tissue

Normal fetus subjected to destructive problem causing breakdown or loss of normal tissue

Causes: vascular, infection and mechanical problems

Example: amniotic band sequence (don’t need to karyotype)

Usually sporadic; but in large series there are more associated anomalies

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10
Q

Dysplasia

A

Abnormal organization of cells into tissue (seen microscopically)

Abnormal migration of cells

Not in use as widely currently

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11
Q

Malformation

A

Poor formation of tissue

A single localized abnormality in formation of tissue that initiates a chain of subsequent defects

Can be nearly normal or more severe

Can suggest a syndromic diagnosis

Many examples in JCB

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12
Q

Syndrome

A

A pattern of anomalies, at least one of which is morphologic, known or thought to be causally related

-A mutation in a key developmental gene may be associated with multiple malformations (called malformation syndrome)

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13
Q

Sequence

A

One or more secondary morphologic anomalies known or presumed to cascade from a single malformation, disruption, dysplasia, or deformation

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14
Q

Anomaly

A

An anatomic (microscopic and macroscopic) phenotype that represents a substantial departure from the appropriate reference population

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15
Q

Phenotypic Heterogeneity

A

Different mutations in a gene

Hypochondroplasia (H)
Thanatophoric dysplasia (T)
Achondroplasia (A)

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16
Q

Non-specificity of cleft lip/palate

A

Isolated cleft lip/palate

Vs.

Syndromic cleft lift/palate (EEC syn.)

Syndromic will see anomalies elsewhere as well

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17
Q

Syndromes related by Pathway

A

“Ras-opathies”
Different genes mutated in same pathway
All increase risk of cancer

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18
Q

Normal Developmental Processes (list)

A
Fundamental problem
Proliferation
Differentiation
Migration
Apoptosis
Rac1
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19
Q

Fundamental Problem (development)

A

Turn a single cell (fertilized egg) into a fully and normally developed organism

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20
Q

Proliferation (development)

A

Increase cell number by division

21
Q

Differentiation (development)

A

Formation of specialized cell types

22
Q

Migration (development)

A

Cells move in characteristic patterns

23
Q

Apoptosis

A

Cells die in the characteristic patterns

24
Q

Rac1

A

Multiple roles in cellular functions, including actin cytoskeleton organization, cell adhesion, migration, proliferation, and apoptosis in mammalian cells

25
Q

Probability

A

Inbred strains of mice, genetically identical

The same formin gene mutation causes renal aplasia in only 20% of the carriers of the mutation

What explains the difference in the occurrence in affected vs. unaffected?

26
Q

Cell Proliferation

A

Needed for growth to occur

Excess cell reproduction causes abnormally large body structures, often with abnormal function

No karyotype needed, cell increase on one side

Ex. Hemihyperplasia

27
Q

Human Tumors

A

Dysfunctional p53 proteins

Functional p53: tumor suppressor protein

Cell cycle clock, Cyclins, CDK

Inhibitory proteins like p53 induce cell death

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Differentiation
Hematopoiesis- specification, fate Nerve cells don't make hemoglobin and red blood cells don't make synaptic proteins Stem cells and gene therapy Changes are due to epigenetic changes, not mutations of DNA
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Cryptorchidism
Failure of descent of the testes Caused by abnormalities in hormones, nerves or connective tissues Reported in 350 syndromes
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Apoptosis
Programmed cell death, essential to morphogenesis During development, apoptosis is main cell death type Adulthood: apoptosis maintains homeostasis (i.e in gut, blood, CNS) 30% of original cells form organism
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Apoptosis Examples
Rat eye lens: partial apoptosis removes nuclei in a process called nuclear death, leaving remainder as functional lens Heart: cell death needed for 4 chambers Genitalia: degeneration of ducts: mullerian ducts regress in males, wolffian ducts regress in females Hands
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Apoptosis: Hands
Classic example of apoptosis Removal of interdigital webs Rac1: overlap of functions
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Cellular Migration
Add from lecture
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Neuronal Migration
Heterotopias: normal neurons in wrong place ``` Periventricular nodular heterotopia (PNH)-most common, neurons that never migrate Genes involved: FLNA (most common) LIS1 (lissencephaly) DCX (doublecortin) ```
35
Tuberous sclerosis
Hamartomas (tumors): abnormally firm areas of cortex, Cardiac Rhabdomyoma (lumpy heart) Skin and nail findings: ungual fibroma (nails), facial angiofibroma, ashleaf spots Seizures Genes: TSC1, TSC2
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Body Patterning: Laterality
Situs Solitus- normal positioning of organs Situs Inversus- mirror, primary ciliary dyskinesias, Kartagener's Situs Ambiguous- mixed, ZIC3 (10% familial cases)
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Body Patterning: Hox
HOX genes: regional selection of developmental fate (limbs and vertebrae patterning, craniofacial structure and innervation) Expressed along the dorsal axis from the hindbrain to the tail
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HOX Genes
Temporal colinearity: 3' HOX genes expressed earlier than 5' genes Spatial colinearity: 3' HOX genes expressed more anteriorly than 5' genes
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HOX Genes (human examples)
Anterior- Head HOXA 1: athabaskan brainstem dysgenesis Posterior- Tail HOXA 11: radioulnar synostosis with amegakaryocytic thombocytopenia
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PAX Genes
Transcription regulators Initiate and orchestrate eye development May function as proto-oncogenes Human aniridia: PAX-6 WAGR: aniridia-wilms tumor association PAX-6 deletion (contiguous deletion) Wilms tumor due to loss of WT1 gene
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PAX Genes and Eye Development
Waardenburg Syndrome (I-IV) Type I: PAX3, autosomal dominant Heterochromia- no vision problems Hypertelorism: widely set eyes White forlock and deafness Type IV: Hirschsprung disease, aganglionic megacolon
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Sonic Hedgehog/SHH
Holoprosencephaly (alobar, semilobar, lobar) Clefting Missing/malformed midline structures (thalami, olfactory bulbs, optic bulbs, pituitary) Cyclopia Single central incisor (teeth) Absent frenulum Narrow spread eyes
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Genetics and Dysmorphology
Goals of evaluation: prognosis, management options and recurrence risk estimate How to study? Patients as they present, animal models
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Congenital Anomalies
2-3% of all newborns Leading cause of neonatal morbidity and mortality (20% of infant deaths, 10% NICU admissions, 25-35% of deaths) Pediatrics admissions: 25/30% have major birth defect
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Normal Development
Single fertilized cell becomes human with 10^13 to 10^14 Several hundred cell types Dozens of tissues