2017 PP Flashcards
Cubic Crystal System
a=b=c alpha=beta=gamma=90degrees
Orthorhombic system
a does not = b does not = c BUT alpha=beta=gamma=90degrees
Multiplicity in Orthorhomic systems
We say that in orthorhombic systems the peaks (h00) have a multiplicity of 2, the peaks (0k0) have a multiplicity of 2, and the peaks (00l) have a multiplicity of 2.
Describe an octahedral splitting diagram
Split into 3 lower degenerate t2g d orbitals and 2 higher eg orbitals- separated by energy delta O (^2)
What effects delta O/T
Identity of ligand- same order of splitting is followed regardless of identity of metal ion
Examples of strong field ligands that give rise to high energy transitions
py-NH3 CN- CO (pi acceptors)
Examples of weak field ligands that give rise to low energy transitions
I- Br- SCN- CL- (pi donors)
Ligand field strength also depends on- that CFT doesn’t explain .. explain effect
Identity of central metal ion- Value of delta O increases with oxidation state of central metal atom- and increases down a group. Variation in OX states reflects smaller size more highly charged ions therefore shorter ML distances and stronger interaction energies. Increase down group due to larger size of d orbitals therefore stronger interaction with Ls
Ligand field stab E (CFSE)
Treats ligands as point charges/ dipoles- does not take into account overlap of ligand/ metal orbitals NEED LIGAND FIELD THEORY
Additional stab relative to the barycentre
Pairing energy
If delta O/T is smaller than P
Coulombic repulsion when pair electrons
Weak field case
When is Octa complex low spin and high spin
3d4 configuration is low spin if CF is strong but high spin if CF is weak- same applies to 3d5,6,7
Deviation of hydration enthalpies from straight line arises from
additional LFSE in oct. complexes formed from the free ion
Describe tetra splitting diagram:
explain why Delta O > delta T
3 higher in t2, 2 lower in e…. delta T < delta O as complex with fewer ligands none of which are directly orientated at d orbitals
FOR TETRA ONLY HIGH SPIN COMPLEXES
What favours Square Planar complexes
d8, strong CF- tendency enhanced for 4d/4d metals because of larger size and greater ease of electron pairing
Jahn Teller effect
If the ground electronic configuration of a non linear complex is orbitally degenerate, and asymmetrically filled, then the complex distorts so as to remove the degeneracy and achieve a lower energy level.
Oct. axial elongation more common than compression
Jahn Teller possible for?
Oct= d1,2,4 low spin….d5,6,7 high spin
Tetra: d1,,3,4,6,8,9
Pi donor ligands
decrease delta O whereas pi acceptor ligands increase delta O
Has filled orbitals of pi symmetry abound the ML axis
Halides- OH-, O2-, H2O, SCN-
Pi Base
E lower in energy than M d Os ONLY interact with t2g Os
Decrease delta O
Pi Acceptor Ligand
Empty Pi Os Pi Acid vacant anti bonding Os (LUMO) higher in energy than M d Os Increase delta O py-NH3, CN-, CO
Microstate
Different ways in which electrons can occupy the orbitals specified in the configuration
Terms
Group together microstates that have same energy when take into account e-e repulsions- spectroscopically distinguishable energy levels
Use Clebsch-Gordan series to determine L,S
L=0(s), 1(P)…
Hund’s Rule
Identifies ground term of gas-phase atom or ion
For a given configuration- the term with the greatest multiplicity lies at the lowest energy
For terms of given multiplicity, the term with the greatest value of L lies at lowest in E
Selection rules
Electronic transitions with a change of multiplicity are forbidden
Laporte selection rule: Trabsitions between d Os are forbidden in oct complexes- asymmetrical vibrations relax this restriction
Chatt Dewar Duncanson model vs Metallacyclopropane model
draw
Perovskite structure
ABO3
A= large CN= 12
B CN= 6
Ilmenite Structure
ABO3 A, B Both SMALL cations HCP draw it with o layers A and B occupy 2/3 of oct holes, occurring in alternate layers
Normal spinel
A in Tetra holes
B in Octa holes
1/2 oct holes filled
1/8 tetra holes filled
inverse spinel
B in tetra sites
A+B in octa sites
Biofuels
Reduce dependence on oil, gas, coal
competition with food production, changing land use, extra fertilizers/ pesticides
Sustainable chem
Environment, energy, health, economics
12 principles Green Chem
- Better to prevent waste than to treat and clean up
- synthetic methods designed to use all materials for product
- Synthetic methodologies little or no toxicity to human health and environment
- chem products designed to preserve efficacy of function while reducing toxicity
- use of auxiliary substances made unnecessary
- E minimized- synthetic methods at ambient temp and pressure
- chemical products designed so at end of function do not persist in environment
- substances in chem processes should be chosen to minimize potential for chem accidents
Atom economy- design factor of chem process- additional consideration to yield, ease of product isolation and purity requirements
even if 100% yield still can have more waste than product
= MR desired/ MR all *100
E factor considers solvents as well= mass of by product/ mass product
Friedel-Crafts reactions
Zeolite
Serious safety concerns
catalytic
Considerations for Biofuels/plastics
life cycle
Recycling
issues
element may be highly dispersed
alloys
contamination during recycling
Element concerns
companion metals
Energy- reduction in chem processes
alternative energy sources
Ultrasoniction microwave reactors photochemistry electrochemistry hydrothermal/solvothermal
Risk and Hazard
major consideration in Green Chem
how to reduce risk
Risk = hazard*exposure
1. reduce exposure- tighter regulations, more safety equipment
2. reduce hazard
design out hazard and won’t need to worry about exposure
Chitin
Skeletal structure made purely from organic material
polysaccharide
requires a lot of energy to make
Problems with organic skeletal tissue/ inorganic
not very hard BUT tough and flexible…. hard but brittle
ideal solution if a composite
Composite + example
Organic matrix filled with inorganic mineral
Crab shell- Chitin + CaCO3
tough and flexible and hard
main functions of biominerals
Protection, motion, cutting grinding, buoyancy, optical/magnetic/gravity sensing/ storage
mostly crystalline
Define a polymorph
give example
Different crystalline structures of the same material
CaCO3
Two most stable polymorphs of CaCO3
Calcite and aragonite and they are the most common
What are bones and teeth made out of
Hydroxyapatite HAP- calcium phosphate
often sub CO3(2-) and F- for PO4(3-)
with has smaller sol. product therefore phase less soluble- prevents tooth decay
Amorphous
disordered- does not have long range order and cannot diffract X-Rays
atoms are irregularly arranged and bond lengths and angles vary throughout the structure
Describe Silica and why under ambient conditions is it amorphous
Contains v stable Si-O-Si bond which has a lot of variability in the bond angle, leads to disorder, much higher temps needed to generate crystalline form- quartz
Diatom
Living organism that uses Silica to make shells
Why does grass incorporate silica into its structure
uses in leaves but also in husks around the seeds to make them less palatable to a hungry animal
Anisotropic
Crystalline materials have distinct fracture planes
Isotropic
Amorphous, disordered- do distinct directions in material- easier to mould into certain shapes
Uses of Iron Oxides
Magnetotactic bacteria- mixed valence iron oxide- magnetite (FeO4) allow them to navigate using Earth’s magnetic field
Ox states in Magnetite
Fe3+ Ferric ion
Fe2+ Ferrous ion
Purpose of Ferritin
Protein- found in almost all living organisms, acts as ion buffer, providing ion to critical biological systems in a controlled way- preventing toxic build up of soluble ion
How do Molluscs use iron oxide
Limpet teeth- goethite and chiton teeth- mix of lepidocrite and magnetite- crystalline iron oxide mineral forms hard cutting edge to teeth used to scrape algae from rocks
Describe mother of pearl
and what is the structure called
how effective
layer in many shells composed of tablet blocks of aragonite (CaCO3) that are apporx. 0.5um thick, sandwiched between 30nm sheets of organic protein- polysaccharide matrix. called NACRE
effective in resisting crack propagation- 3000x stronger than pure aragonite
Bone
why known as a living material
Organic matrix with organized crystals of hydroxyapatite
organic matrix- fibrils of collagen (protein)
Responds to internal and external signs and is continually growing, dissolving and remodelling. Composition depends on animal and where in body.
How do living organisms employ method to control formation if inorganic materials?
Intarcellular (compartments within cells)
Intercellular (spaces between closely packed cells)
extracellular (Within insoluble macromolecular framework)
2 main processes of biomineralization
- Boundary organized biomineralization
2. Organic matrix-mediated biomineralization
Define solubility of an inorganic salt
The amount (moles/ mass) of a pure solid that will dissolve in a litre of solvent at a given temperature
When does dissolution occur
when the free energy required to disrupt the lattice bonding is smaller than the free energy released in the formation of aqueous species
Define the solubility product
an equib constant- related to the solubility on an IO salt- generally ionic solid containing monovalent ions
Ksp = aM+*aM- (activity product)
a is the effective conc.s (activities) of ions in sol. in equib. with the solid phase
define saturation
state of equib. with the undissolved solute in equib with the dissolved solute
define equib.
dissolution = precipitation
saturated solution
Define supersaturation
if the actual conc. (activity product) is higher that the solubility product, then precipitation will occur until Ksp = actual conc.
determination difficult in biological fluids as presence of many organic molecules
indicates how much solution is out of equib. and is a measure of TDY driving force for inorganic precipitation
Explain Ostwald Ripening
Sol. not contant but increases with diminishing crystal size- because small crystals have high surface to volume ration. This means that the surface energy begins to outweigh the lattice energy. Effect in mixture of crystal sizes- smaller crystals are dissolved but larger ones grow.
define SS by equation
ratio of the activity product to the equib. sol. product
= (aM+*aM-)/Ksp
at equib. =1
if greater than 1 then material will precipitate from solution
The TDY driving force is … + equation
the difference in chemical potential between a supersaturated solution and a solution in equib. with solid
delta u = kTlnS
Define nucleation
when SS>1 sol in state of SS, solid phase can begin to precipitate
define homogeneous nucleation
spontaneous formation of nuclei in solution- not realistic given that most solutions contain contaminants such as dust
define heterogeneous nucleation
formation of nucleus on existing surface
surface energy- interfacial energy term (delta GI) is decreased- overall energy demand for nucleation is decreased. therefore occurs at lower SS than HOMO
Explain Epitaxy
growth of IO crystalline phase onto pre-existing substrate also crystalline- can direct the orientation of the new phase so both phases are crystallographic ally oriented.
requires high level of lattice matching
Explain classical crystal growth theory
adsorption of solute atoms, molecules, ions onto crystal face- unit then able to move freely in two dimensions until reaches step/ kink and integrates into crystal lattice. Step and kink sites have higher binding energies than a flat face so new units will keep adding to these sites until one layer is completed.
Explain evolution of new layer in CC growth
once one face completed- generation of new nucleation site- requires more energy- evolution of new layers depends linearly on SS. Higher S enables nucleation of new layers.
V high SS can lead to Polynucleation
What is the morphology of a crystal dependent on
surface energy of different crystal faces which in term are dependent on the growth environment.
Rate of growth of a crystal face related to
surface energy- faces that have high energy will grow quickly and disappear whereas faces with low energy will grow slowly and dominate the final shape
Why do different crystal faces have different energies
Different surface atoms
different unsaturated/ dangling bonds
different polarity, hydrophilicity and solvent interactions
Some additives can absorb selectively onto certain faces- this slows down/ prevents growth in that direction
Non classical crystal growth
systems go via intermediate polymorphs
for SS for a less soluble crystalline polymorph, the eqib sol product will be lower
involves aggregation of primary nanoparticles
Different polymorphs of Calcium Carbonate from soluble (TDY stable)–> less soluble
Amorphous CaCO3
Varerite
Aragonite
Calcite
On TDY grounds expect crystalline phase to be the one that precipitates
SS is higher than non classical
Kinetic control of crystal growth
not lowest energy product (TDY) - kinetic control
formation of a less stable polymorph
trap phases
TDY control most important at
Kinetic at
low SS
High SS –> intermediate phaes
Kinetic effect on Crystal growth
High SS therefore big driving force for precipitation- the kinetically favoured crystal forms- intermediates first to be precipitated— results in aggregation pathways.
TDY pathway for Crystal growth
Single/ low number of nucleation events and subsequent slow growth to single crystals
2 different processes for aggregation
oriented attachment
mesocrystals
oriented attachment
primary nanoparticles self-organize to a superstructure with a common crystallographic orientation
particles then fuse together to produce a single crystal
driving force = minimization of high energy surfaces
Increase in entropy as molecules displaced that were adsorbed on the fusing surfaces
Mesocrystals
3D superstructures of nanoparticles that are crystallograhically aligned
nanoparticles remain distinct separated by organic of amorphous IO material or by porous space
What happens if surfaces of nanoparticles in mesocrystals are not stabilised
may transform into single crystals via oriented attachment
example of stable mesocrystal
Sea urchin- nanoparticles of calcite separated by amorphous material
Describe boundary organized mineralization
Living organisms create enclosed spaces which are separated from the general environment of the cell-
functions-
control shape of mineral phase
control diffusion of ions
stab minerals against dissolution or phase transformation
transporting minerals to different sites
Type of compartments in BOBioMin
Vesicles- fluid filled compartments surrounded by phospholipid bilayer or protein shell.
Or cells can join together to create sealed space where surrounding cells control the chem of inner space through diffusion- osteoblasts in bone growth
How do spatial boundaries control SS
Ion pumping- biological membranes contain sites for selective ion transport
ion complexation- binding cations with ligands such as citrate lowers SS by reducing activity
Enzymatic regulation- enzymes can control the formation of solid IO species by influencing reaction equib. or directly providing crucial ions
proton pumping- change in pH can change acid base equib of anions/ hydrolysis of metal ions.
Describe organic matrix- mediated BioMin
Insoluble macromolecular frameworks to control mineralization- function of matrix-
modification of physical properties of the material such as strength and toughness- e.g. collagen in bone
stab of minerals against dissolution or phase transformation
controlling nucleation sites or directing crystallographic orientation- lower Eact by reducing interfacial energy… organize direct nulceation
briefly describe sol gel chem
soft material synthesis, refers to hydrolysis and condensation of metal alkoxides
define a gel
non-fluid colloidal network or polymer that is expanded throughout its volume by a fluid
What are the 4 types of gels and their bonding
Metal-oxo or hydroxo polymer- Covalent bonds- extended networks
Metal complex (urea) - M complexes weakly connected by VDW or HB often viscous solutions rather than gels
Polymer complex- Organic polymers corsslinked by VDW or HB
Collodial- network or particles linked by electrostatic VDWs
Sol gel process
Formation of sol ( stable suspension of colloidal particles or polymers)
Gelation through polycondenstaion/ esterification- extended network of covalent bonds
Aging- syneresis- continued Polycondensation to solid network- contraction and expulsion of solvent pores
Drying- remove solvent
Sol gel process of silica
Hydrolysis (acid base catalysed)
Condensation- formation of siloxane bond. acid/ base catalysed
The structure of silica gel depends on.
The relative rates of hydrolysis and condensation, any factor that effects the reaction rates will affect how the gel develops
high pH- basic conditions- give:
Low pH- acidic conditions- give
colloidal, or particle gels
networks of interconnected chains
Rate of hydrolysis and condensation depends on-
sterics - hindrance by bulky groups inhibits attack by water
and inductive effects- electronic stab/destab of TS
Hate of hydrolysis decreases as…
more alkoxy groups are hydrolysed. Therefore, condensations starts to occur before hydrolysis is complete and condensation tends to occur on terminal silicons- resulting in linear products- eventually tangle and crosslink to form gel
the rate of hydrolysis decreases as…
more alkoxy groups are hydrolysed. Therefore, condensations starts to occur before hydrolysis is complete and condensation tends to occur on terminal silicons- resulting in linear products- eventually tangle and crosslink to form gel
Acid Catalysed summary
Positive TS- Stab by EDGs - Progressive hydrolysis steps slower- condensation on terminal silicons- linear products- network gels
the rate of hydrolysis increases as…
more alkoxy groups are hydrolysed
base catalysed summary
Negativ TS- stab by EWGs- progressive hydrolysis steps faster- multiple condensation steps- particle gels
other factors affecting rates in sol gel
Solvent- allows immiscible reactions
water- small = slow since water is a reactant… large = slow due to dilution… highest rate at intermediate point
substituents- inductive and steric effects
how to form an xerogel
fast and uncontrolled drying
how to form an aerogel
slow and controlled drying but can collapse to xerogel