20-22 Transcription and its Control Flashcards

1
Q

What is the most abundant type of RNA in a cell? What type of RNA polymerase does this?

A

rRNA from RNA polymerase I

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2
Q

What are the five main eukaryotic RNA polymerases?

A
  • I
  • II
  • III
  • Mitochondrial
  • Chloroplast
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3
Q

What are some subunits in common between the three eukaryotic RNA polymerases (I - III)?

A

?

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4
Q

Which RNA polymerase is most similar in both prokaryotes and eukaryotes?

A

RNA polymerase II shares many similarities in its core sequence.

  • Mitochondrial RNA polymerase
  • Chloroplast RNA polymerase
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5
Q

Why is RNA polymerase I barely regulated?

A

Because it is responsible for transcribing pre-rRNA genes (except for 5S-rRNA). And the cell always needs more ribosomes.

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6
Q

What is TBP?

A

TATA binding protein

  • a transcription factor
  • Part of RNA polymerase I
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7
Q

Where is eukaryotic RNA polymerase I active?

A

The nucleolus

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8
Q

Does a membrane surround the nucleolus?

A

No, it is simply a region of the nucleus where ribosomes are built and rRNA genes are located.

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9
Q

What RNA polymerase transcribes small RNA genes?

A

RNA polymerase III

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10
Q

How are eukaryotic RNA pol III promoters unusual?

A

They can be located within the gene that they promote

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11
Q

Which eukaryotic RNA polymerase is inhibited for ribosome building? How?

A

RNA Pol III

  • 5S rRNA can inhibit transcription of itself and therefore regulate ribosome production
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12
Q

Which RNA polymerase transcribes mRNA genes and some snRNAs in eukaryotes?

A

RNA polymerase II

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13
Q

What is TATA binding protein (TBP)?

A
  • Binds with TATA box (-20/-30 upstream) in eukaryotic transcription
    -
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14
Q

What are cis elements?

A

Part of DNA sequence

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15
Q

What are trans elements?

A

Non-DNA (eg. proteins, mRNA etc.)

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16
Q

Ehat part of RNA pol II recognizes TATA box elements and the promoter?

A

TFIID complex

17
Q

What composes the TFIID complex in eukaryotic RNA Pol II? (2)

A
  • TBP (TATA binding protein)

- TBP-associated factors (TAFs)

18
Q

How can regions of DNA that are many base pairs away from each other, effect/modulate each other?

A

Because DNA is oriented in 3D space, so these elements may be physically close.