1.6 (Recording from the brain) Flashcards

1
Q

What was the early approach to understanding the brain in philosophy and science?

A

Through structured introspection, based on thinking about thought.

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2
Q

What major shift occurred in the study of the brain in neuroscience?

A

The shift from introspection to observing neural dynamics and recording brain activity.

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3
Q

What is the ideal scenario for recording from the brain?

A

Recording all voltage changes in all neurons and levels of various chemicals.

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4
Q

What are the two primary compromises in brain recording methods?

A

Between spatial and temporal resolution, and the degree of intervention.

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5
Q

Describe an in vitro experiment for brain recording.

A

Brain slices from animals are kept alive in a controlled environment, allowing detailed voltage recordings from neurons.

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6
Q

What is the key difference between intracellular and patch clamp recordings in in vitro experiments?

A

Intracellular recordings puncture the neuron membrane, while patch clamp recordings seal onto the membrane without puncturing.

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7
Q

Why is the hippocampus commonly used in in vitro experiments?

A

Its laminar structure makes it easier to prepare and study.

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8
Q

What is the main limitation of in vitro recording methods?

A

Neurons are outside their natural environment, with damaged neurites and an abnormal chemical environment.

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9
Q

What distinguishes in vivo electrophysiology from in vitro?

A

In vivo electrophysiology is conducted in living, often awake animals.

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10
Q

How do high-density silicon probes improve in vivo recordings?

A

They provide multiple recording sites, allowing better accuracy through spike sorting.

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11
Q

What is the role of spike sorting in in vivo recordings?

A

Spike sorting algorithms assign spikes to individual neurons, despite the mixing of signals from multiple neurons.

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12
Q

What are place cells and how are they studied?

A

Neurons that fire in specific spatial locations, studied through spike recordings in animals exploring mazes.

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13
Q

What major limitation exists in in vivo electrophysiology regarding animal welfare?

A

It is an invasive procedure, raising ethical concerns.

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14
Q

What does calcium imaging measure in the brain?

A

Calcium ion concentrations using calcium-sensitive fluorescent proteins or dyes.

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15
Q

What is a notable constraint of calcium imaging in measuring neuron activity?

A

Calcium signals are slower than spikes, requiring deconvolution algorithms to interpret spike timing.

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16
Q

What is a ‘virtual reality’ experiment in calcium imaging for rodents?

A

The animal’s head is fixed under a microscope, with movement simulated through a wheel or ball.

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17
Q

What makes calcium imaging ideal for studying brain activity over time?

A

It can track the same neurons over successive days, useful for studying development and long-term processes.

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18
Q

What is the main principle behind Electroencephalography (EEG)?

A

Recording electrical activity from the brain through electrodes placed on the scalp.

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19
Q

Why is EEG considered to have poor spatial resolution?

A

The signals are a blend of multiple neural sources, resulting in a broad and noisy average.

20
Q

What significant discoveries were made possible by EEG?

A

The identification of sleep stages and study of epilepsy.

21
Q

What advantage does Magnetoencephalography (MEG) have over EEG?

A

MEG is less affected by skull and tissue interference, providing clearer signals than EEG.

22
Q

What limitation does MEG face despite its advantages over EEG?

A

It is very costly and requires superconductors, making it less accessible.

23
Q

How does Magnetic Resonance Imaging (MRI) produce images?

A

By using an oscillating magnetic field to alter atomic energy states, detected as radiofrequency emissions.

24
Q

What is Diffusion Tensor Imaging (DTI) used for in MRI?

A

To map neuronal tracts, revealing brain connectivity.

25
What does fMRI measure and how does it track brain activity?
It measures the BOLD signal, reflecting oxygenated blood levels in different brain areas.
26
What are the key limitations of fMRI?
Poor temporal resolution and significant physical constraints on participants’ movement.
27
Summarize the main trade-offs in different brain recording techniques.
They vary in spatial and temporal resolution, invasiveness, behavioral constraints, and cost.
28
What are Designer Receptors Exclusively Activated by Designer Drugs (DREADDs)?
Genetically engineered receptors activated by specific synthetic drugs, allowing targeted control of neuron activity.
29
What is the significance of optogenetics in neuroscience?
It enables precise control of neuron activity using light, enhancing the ability to study specific neural circuits.
30
How do dyes that transport through synapses aid neuroscience research?
They allow researchers to trace cell connectivity by visualizing the cells linked in neural networks.
31
What is intracellular recording and what does it measure?
A method that penetrates the neuron’s membrane to measure internal voltage, crucial for analyzing synaptic potentials.
32
What is extracellular recording and in what context is it commonly used?
It measures electrical activity outside neurons, often in high-density electrode arrays for network-level studies.
33
Why is it challenging to conduct in vivo electrophysiology experiments in awake, behaving animals?
The need to tether electrodes to recording equipment limits the naturalistic conditions of such experiments.
34
What does the term 'head stage' refer to in in vivo brain recording?
A mounted apparatus on an animal’s head to stabilize the electrode access point during awake recording.
35
What kind of data does EEG primarily capture?
Electrical activity from synchronized neural populations, providing insights into overall brain state changes.
36
Why are EEG signals often considered 'noisy'?
They amalgamate numerous small electrical fields, resulting in a blurry, averaged signal of brain activity.
37
In what way does spike sorting impact in vivo neural recordings?
It attempts to differentiate signals from individual neurons when multiple neurons’ spikes are mixed.
38
How does the BOLD signal in fMRI relate to brain activity?
It represents blood oxygen levels, which correlate with areas of increased neuronal activity.
39
What is the temporal limitation of fMRI, and why does it matter?
The BOLD signal averages activity over approximately 3 seconds, limiting detection of fast neuronal events.
40
Describe the spatial resolution of fMRI.
High spatial resolution, typically resolving down to a cubic millimeter per voxel.
41
How does calcium imaging differ from electrophysiology in terms of neuron monitoring?
Calcium imaging tracks slower, calcium-related activity, while electrophysiology captures fast electrical spikes.
42
Why is it beneficial that calcium imaging can record from the same neurons across multiple days?
It enables the study of long-term processes and developmental changes in specific neurons.
43
What is one ethical limitation of invasive recording methods such as in vivo electrophysiology?
They require physical intervention in the brain, raising animal welfare concerns.
44
Explain how diffusion-tensor imaging (DTI) contributes to our understanding of brain structure.
DTI maps the direction and integrity of neural tracts, helping visualize brain connectivity.
45
What is the primary challenge in measuring spike times through calcium imaging?
Calcium dynamics lag behind fast spike activity, requiring computational deconvolution to approximate spike timing.
46
How does functional MRI differ from structural MRI?
fMRI measures functional brain activity, while structural MRI provides detailed anatomical images.