14/15/16 Flashcards
Extracellular Matrix
Provides structural support to cells and tissues and plays important roles in regulating cell behaviour
Cell Wall
Determines cell shape and prevents cells from swelling/bursting as a result of osmotic pressure
Bacterial Cell Wall Shapes
Rod, spherical, spiral
Gram Negative Bacteria
Dual-membrane system with thin cell wall in between
Gram Positive Bacteria
One plasma membrane surrounded by a much thicker cell wall
Peptidoglycan
Main component of all bacterial cell walls, linear polysaccharide chains cross-linked by short peptides
Cell Wall and Antibiotics
Cell wall structure makes some bacteria vulnerable to some antibiotics
Penicillin
Inhibits the enzyme that forms the cross-links in the cell wall, preventing growth and synthesis
Bacterial Cytoskeletal Proteins
Regulate cell wall synthesis
FtsZ
Cytoskeletal protein that forms a ring structure at the site of bacterial cell division and directs synthesis of a new cell wall
What are cell walls of eukaryotes composed of?
Polysaccharides
Chitin
Forms fungal cell walls and exoskeletons of arthropods
Cell Walls of Algae and Higher Plants
Cellulose
Hemicelluloses
Highly branched polysaccharides H-bonded to the surface of cellulose microfibrils. Provide stability and mechanical strength.
Pectins
Branched polysaccharides with many negatively charged galacturonic acids. Cross-link microfibrils, negative charges bind positive ions to trap water molecules and form gels.
Microfibrils
36 cellulose chains joined in parallel, can extend for many micrometers in length, embedded in a matrix of proteins/pectins/hemicelluloses
Primary Cell Walls
Relatively thin and flexible to allow expansion of a growing cell, equal amounts of cellulose/hemicelluloses/pectins, randomly arranged cellulose fibres
Secondary Cell Walls
Laid down between plasma membrane and primary cell wall after cell wall growth has stopped, no pectins, 50-80% cellulose, highly ordered layers with a strong laminated structure
Lignin
Complex polymer of phenolic residues that gives strength and density to wood
Turgor Pressure/Hydrostatic Pressure
Water builds up in cell, eventually equalizing the osmotic pressure and preventing further influx of water, responsible for the rigidity of plant tissues
Auxins
Plant hormones that activate expansins to allow expansion
Expansins
Proteins that weaken regions of the call wall to allow expansion
Water and the Vacuole
Water flows into the cell and accumulates in a large central vacuole so the cell can expand without increasing the volume of the cytosol
Cellulose Synthase
Trans-membrane enzyme that synthesizes cellulose from UDP-glucose
Microtubules
Guide movement of cellulose synthase and define orientation of newly synthesized microfibrils
Cortical Microtubules
Define the direction of cell wall growth and expansion and ultimately the shape of the entire plant
CLASP
Binds the + end of microtubules to regulate stability. Mutations that inactivate CLAPS results in stunted plants.
Basal Laminae
Thin layers that epithelial cells rest on. Also surrounds muscle cells, adipose cells, and peripheral nerves.
Extracellular Matrix
Embeds most animal cells, most abundant in CT, tough and fibrous proteins embedded in a gel-like polysaccharide
Adhesion Proteins
Link components of the matrix to one another and to attached cells
Tendon EM
High proportion of fibrous proteins
Cartilage EM
High level of polysaccharides that form a compression-resistant gel
Bone EM
Hardened by calcium phosphate crystals
Collagen
Major structural protein of EM, forms triple helices or repeat aa sequence Gly-X-Y
Glycine
Smallest amino acid, allows polypeptides to pack closely together in collagen
Proline
Frequently found in X position in collagen, stabilize helices
Hydroxyproline
Y position in collagen, stabilize helices, formed in ER by modification of proline in collagen polypeptide chains
Hydroxyl Groups in Collagen
Stabilize triple helix by forming H-bonds
Type I Collagen
Most abundant, forms collagen fibrils
Collagen Fibrils
Triple helical molecules form regular staggered arrays in them, strengthened by cross-links of lysine and hydroxylysine side chains, come together to form collagen fibres
Procollagens
Aid in assembly of fibrils outside the cell
Fibril-Associated Collagens
Bind to collagen fibrils and link them to one another and to other matrix components
Type IV Collagen
Mostly basal laminae, forms networks, Gly-X-Y repeats interrupted by short non-helical sequences to make them more flexible
Anchoring Fibrils
Link some basal laminae to underlying CTs
Elastic Fibres
Common in CT of organs that stretch and return to shape, made of elastin
Elastin
Cross-linked into a network to make elastic fibres, behaves like a rubber band
GAGs
Glycosaminoglycans, repeating units of disaccharides, form EM gels, highly negative because of sulphate groups, bind positive ions and trap water molecules to form hydrated gels, linked to proteins to form proteoglycans
Hyaluronan
Only GAG that is a single long polypeptide chain, synthesized at plasma membrane by a transmembrane hyaluronan synthase
Proteoglycans
GAGs linked to proteins, interact with hyaluronan to form large complexes in the extracellular matrix
Aggrecan
Major proteoglycan of cartilage, about 100 chains of chondroitin sulfate attached to a core protein
Fibronectin
Main adhesion protein of CT, often cross-linked into fibrils, binding sites for both collagen and GAGs to enable cross-linking
Laminin
Adhesion proteins in basal laminae, 3 ppc with rod-like domains and interspersed globular domains, subunits have binding sites for surface receptors and proteoglycans, can self-assemble into networks
Nidogen
Adhesion protein that also binds type IV collagen, tightly associated with laminins
Integrins
Transmembrane proteins that attach cells to the EM, heterodimers, bind to various components of the EM, anchor cytoskeleton to EM, can reversibly bind matrix components
Integrins as Heterodimers
Different combinations of subunits result in 24 different integrins
Types of Cell-Matrix Junctions
Focal adhesions and hemidesmosomes
Focal Adhesions
Bundles of actin filaments anchored to β subunits of integrins via other proteins, can be very stable or turn over rapidly as cells move
Hemidesmisomes
Anchor epithelial cells to basal laminae
How do integrins reversibly bind matrix components?
Due to their ability to change conformation between active and inactive states
How do animal cells modify their EM?
Via enzymes that modify glycosaminoglycans and proteases that digest collagen
Metalloproteases
Digest a variety of matrix proteins, play important roles in normal movements of cells during development and in the growth and metastasis of cancers
First Metalloprtease
Discovered in tadpole tails during metamorphosis
Cell Adhesion Molecules
Mediate cell-cell adhesion, selectins/integrins/immunoglobin superfamily/cadherins
Selectins
Mediate transient interactions between leukocytes and endothelial cells or blood platelets, bind to oligosaccharide ligands on endothelial cells
Heterophilic Interaction
An adhesion molecule on one cell recognizes a different molecule on another cell (ex: binding of ICAMs to integrins)
ICAMs
Intercellular adhesion molecules, members of the immunoglobin superfamily
Homophilic Interactions
An adhesion molecule on one cell binds to the same molecule on another cell (ex: binding between N-CAMs)
N-CAMs
Neural cell adhesion molecules, homophilic binding contributes to associations between nerve cells during development
Cadherins
Mediate homophilic interactions, basis of stable adhesion junctions linking the cytoskeletons of adjacent cells
Adherens Junctions
Link actin filaments of adjacent cells
Nectin
Can form homophilic and heterophilic interactions, present at adherent junctions, form links to the actin cytoskeleton
Desmosomes
Link intermediate filament cytoskeletons of adjacent cells
Tight Junctions in Epithelial Cell Sheets
Form a seal that prevents free passage of molecules and ions between cells, separate apical and basolateral domains of the plasma membrane by preventing free diffusion of lipids and membrane proteins, provide minimal adhesive strength between cells, formed by a network of protein strands that continues around the entire cell
Gap Junctions
Regulated channels through the plasma membrane, allow ions and small molecules to diffuse freely
Connexon
6 connexins, a cylinder with an open aqueous pore in its center, align between adjacent cells to form open channels between the two cytoplasms
Electrical Synapse
Specialized gap junctions on nerve cells, allow rapid passage of ions between 2 nerve cells
Middle Lamella
Pectin-rich region, acts as glue to hold adjacent cells together
Plasmodesmata
Analogous gap junctions for adjacent plant cells to communicate through cytoplasmic connections, form by incomplete separation of daughter cells following mitosis, plasma membrane of one cell is continuous with that of its neighbour to create a channel between the two cytosols, open and close to regulate passage
Plasma Membrane
Defines cell boundary and separates it from the environment, selective barrier that determines composition of the cytoplasm, mediates interactions between cell and environment
Bilayer in Electron Micrographs
Polar heads appear as dark lines because they bind the electron-dense metal stains, fatty acid tails are lightly stained
Mammalian Red Blood Cells and Membrane Structure
Useful model for studies, no nuclei or internal membranes so easy to isolate pure plasma membranes
Glycolipids
Only in outer leaflet of bilayer with carbohydrate portions exposed on the cell surface