1.1 laboratory techniques for biologists Flashcards
define hazard
anything that can cause harm in the laboratory/field
hazards in the lab (5)
toxic/corrosive chemicals
heat
flammable substances
pathogenic organisms
mechanical equipment
define risk
the likelihood of harm arising from exposure to a hazard
define risk assessment
identifying control measures to minimise risk
control measures in the lab (4)
appropriate handling techniques
protective clothing
protective equipment
aseptic techniques
linear dilution series
concentrations differ by an equal interval
0.1, 0.2, 0.3 etc.
logarithmic dilution series
concentrations differ by a constant proportion
10⁻¹, 10⁻², 10⁻³ etc.
use of a standard curve to determine an unknown concentration
plot measured values for known concentrations
formation of a standard curve
determine unknown concentrations
purpose of a buffer
allow addition of acid/alkali without significant effect on pH, so pH is kept constant
use of a colorimeter
calibration with an appropriate blank as a baseline
use of absorbance to determine the concentration
use of % transmission to determine turbidity
use of centrifuge
separates by density
more dense components in the pellet
less dense components in the supernatant
use of paper and thin layer chromatography
separates different substances
the speed which a solute travels depends on its solubility
affinity chromatography
separates different proteins
solid matrix with specific molecules is created
target proteins (high affinity) bind
non-target proteins (weak affinity) are washed out
gel electrophoresis
separates proteins and nucleic acids
an electric field is applied to a gel matrix and charged macromolecules migrate through the gel
native gels
separate proteins by size, shape and charge
native gels do not denature the molecule
SDS-PAGE
separates proteins by size only
all proteins are denatured and given an equal negative charge
define isoelectric point
the pH at which a soluble protein has no net charge and will precipitate out of solution
IEP electrophoresis
separates proteins by their isoelectric points
uses an electric field and pH gradient
proteins will stop migrating through at their IEP as it has no net charge
define monoclonal antibodies
stocks of antibodies with the same specificity
the antibodies are linked to a chemical label
western blotting
used after SDS-PAGE
separated proteins are transferred onto a solid medium
specific antibodies with reported enzymes attached identify the proteins
bright-field microscopy is used to observe
whole/parts of organisms
dissected tissue
individual cells
fluorescence microscopy
fluorescent labels bind to molecules/structures within cells/tissues, allowing visualisation
purpose of aseptic techniques
eliminate unwanted microbial contaminants when culturing micro-organisms/cells
examples of aseptic techniques
sterilisation (of equipment/media) by heat or chemical means
growth factors
contained in serum
proteins that promote cell growth and are essential for the culture of most animal cells
primary cell lines
perform limited divisions
tumour cell lines
perform unlimited divisions
haemocytometers
used to estimate cell numbers
multiply by 10,000
vital staining
to identify and count viable (live) cells
dead cells cannot be distinguished from live cells without staining