1 Flashcards
ELF4E FUnction (2 things)
Binds to 5’ Cap
Affected by mTOR pathway
ElF2 (2)
Binds to and delivers starting Met-tRNA
Uses GTP
Release with GTP dephosphorylation indicates big subunit should bind
When is elf2 phosphorylated
Low AA, Cell stress, Immune response, unfolded proteins
Phosphorylated is turn off
EFL4G (2)
Scaffold
Binds to ELF4E
initiator tRNA-when used
Not used during elongation
GTP hydolysis (3)
ELF2 release, EEF2-ratchet down, EEF1A-drops off tRNA to A site
EEF1A
Binds to tRNA with AA on it
Has GTP
When loses GTP drops off tRNA to A site
EEF2
Pushes whatever in A site to E site
Has GTP
When to GDP ratchets down
When GTP regulation use
EIF2, EEF1A, EEF2
ERF1
Terminator tRNA-catalyzes finished peptide bond from ribosome
Shine Delgarno
Prok enhancer-binds to ribo RNA
Selective inhibition
Prok ribosomes small and divergent from mamlalian
-can inhibit them and not ours
mono vs polycistronic
Proks are poly
Many proteins made from 1 mRNA
miRNA
Creates RISC sequences- no room for initiation
ApoB
Long in liver
Short in intestine
Premature stop codon makes smaller
IRE
Iron recognition element
-translation of mRNA regulated by iron bonding
ElF2B
Makes GDP go back to GTP on ELF2
- poor conditions-ELF2 gets phosphorylated and binds to ELF2B
- sequesters ELF2B
- No GDP to GTP
mTOR pathway
rheostat of cell
- effects ELF4E-repressess trans
- activated during growth
- Causes 4EBP phosphorylation and increased trans
mTOR pathway and hypoxia
inhibits mTOR
-allows 4EBP dephosphorylation and binds to ElF4E, causing decreased translation
4EBP
Binds to elF4e
inhibits trans
When phosphorylated, released from elF4e and translation continues
Phosphorylation reguation
EF2B and 4EBP
DIO
deodinases required for TH synthesis
-made from selenium
eFSEC
specialized elongation factor for Sec-AA tRNA
Sec-tRNA recognizes
UGA
SECIS element
RNA in 3’ UTR that allows SECIS incorporation in translated region
SBP2
Secis binding protein 2
Binds to SECIS element and assists in getting EFSec to ribosome at UGA codons near SECIS element
Mutations result in thyroid cancer
Poliovirus
- Pathway
- Novel ability
Expressed protease that cleaves ElF4G
Poliovirus IREs bind to cleaved ElF4G and recuirt pre-initation complex directly (no need for cap)
Permits efficient viral mRNA translation and hurts host translation
Diptheria
eEF2 inactivation
no trans