01 - Intro to Microbiology Flashcards
Symbiotic organisms live in close nutritional relationships between what two things?
microorganism and host
Between the host and microorgansim which one normally provides nutrients so the other can live?
the host provides to microorganism
T/F: host is always human
true
In commensalism is the host harmed or benefited?
the host is neither harmed or benefited
What is an example of commensalism?
the micro bacteria in our ears; no harm no benefit
- only live there because its warm and dead cells provide nutrients
What is an example of commensalism?
the micro bacteria in our ears; no harm no benefit
- only live there because its warm and dead cells provide nutrients
Within mutualism who benefits?
both members benefit; stronger/better
Within mutualism is it more or less difficult for other organisms to grow?
more difficult
- ex ecoli provides vitamin K and protect us from other organisms in order to defend their own territory
Within a parasitism relationship who is dependent and who benefits?
parasitic microbe is dependent on host and benefits
In parasitism does it describe to us the organism or the relationship?
it describes the relationship
- does not tell us the organism
How do HCP act as vectors?
transmitting mircroorganisms to patients, coworkers and others
In what two ways does bacteria show?
- prokaryotic
- eukaryotic
Characteristics of prokaryotic
- alive
- no nuclei
- single celled
- live singly, in pairs or clusters (bacteria dependent)
- can cause significant infection to humans
How to treat a prokaryotic infection
- way more antibiotics for antiviral and antifungal
- can tell difference because we are eukaryotic and that way they can find a way to target (antibiotics)
Characteristics of eukaryotics
- bacteria very different from us
- lots of targets that we can attack to develop antibiotic
Adverse effects of antibiotics are usually associated with and why?
Symptoms
the gut as the antibiotic kills normal flora
- cramping, diarrhea, bloating
Which signs or symptoms are more severe between viral and bacteria
signs and symptoms from bacteria
Characteristics of viruses
- acellular
- not alive
- not visible by light microscopy
- ## genetic material surrounded by protein coat
t/f: with viruses we tend to get better on our own
true
- immune response to viral pathogen is slower and signs and symptoms are not as severe
Are fungi eukaryotic or prokaryotic
- eukaryotic
characteristics of fungi
- eukaryotic
- have nuclei
- cell wall
- organelles
- obtain nutrients from other organisms
What element of fungi is used as a target for pharm therapy?
- cell wall
Characteristics of protozoa
- eukaryotic
- single celled
- possess a nuclei
- eg. parasites
Characteristics of helminths
- eukaryotic
- multicellular
- possess a nuclei (visible with a naked eye)
- eg. worms
Most infections associated with protozoa and helminths are associated with issues of?
sanitation; do not see these as often
If someone has travelled what should you expect?
parasite
What are the only microbes that we can visually see at certain points in life cycle
Helminths
Bacteria- typical structure
- generic bacteria is rod shaped
- no nuclei
- prokaryotic
- cell walls are important target to classify bacteria
Bacteria Characteristics
- no nucleus
- have smaller separate circles of DNA known as plasmids
- ribosomes smaller than those of eukaryotes
- cell wall and cell membrane
- external cellular structure such as a flagella or pili
Plasmids
- Encode specific factors for organism
- they can be shared with other bacteria
- Train other bacteria to be resistant to it
- FINISH full dose of antibiotics → eliminate all microorganisms
In single celled organisms what can also be targeted for pharm therapy?
ribosomes
The cell wall in prokaryotes are either
gram positive or gram negative
What is an example of a bacteria resistant to antibiotics and why?
MRSA
- Resistant to penicillins
- It has plasmid that tells it how to work around penicillin
- Penicillin cannot work against bacteria
Bacteria classification: cell morphology
● Shape ● Arrangement ● Colony morphology ● External structures ● Capsules ● Spore formation
Bacteria classification: cell wall structure
● Staining and microscopy
● Gram and acid fast (TB) stains
○ Determine if it is a gram positive or gram negative cell wall
○ Helps to determine diagnosis/treatment
Bacteria Classification: growth characteristics
oxygen and energy requirements
Bacteria Classification: Metabolism
- carbohydrate utilization and fermentation products
Bacteria Classification: molecular techniques
- dna sequencing
Cell morphology
● Wide variety in morphology can be identified by direct examination
○ Shape, size, arrangement, presence of spores or capsules
Cell morphology: diplococci
- attached to one another
Cell morphology: cocci
means organism is round
Cell morphology: streptococci
means the organism is in pairs or chains; always round
cell morphology: staphylococci
means bunches; always round
cell morphology: bacilli
rod shaped
cell morphology: coccobacilli
little bit rod and round
Bacteria: Colony morphology
● Characteristics of colonies grown on agar plates = identification For identification: ● Shape (form) of the colony ● Margin/edge ● Elevation ● Surface texture ● Pigmentation
Bacteria External Structures: Flagella
- Protein filaments that extend from the cell membrane
- Motile (rotate 360°)
- Allowing microbe to move in a series of tumbles
- Runs in response to stimuli (light, nutrient density, etc…)
- Move from low nutrient density to high nutrient density
- Bacteria w/flagella have high capacity to make us sick
Number and location of flagellum can be used to classify microbes
● Polar – Vibrio spp. (single)
● Spirillium spp. (double)
● Peritrichous – Escherichia coli spp (tons of flagella)
Bacteria External Structures: Fimbriae
- Straight filaments arising from bacterial cell wall
- Facilitate movement
- Used to “pull” the bacterium across a substrate
- Not used for propulsion
- Facilitate formation of biofilms
- Shorter than flagella
- Act as adhesins
Bind to specific host cell receptors - Important role in adherence, a critical step in infection
- E. coli spp. & Campylobacter jejuni bind to intestinal epithelial cells
Bacteria External Structures: Conjugation Pili
- Used to transfer DNA from one bacteria to another
- Facilitate movement of plasmids
- Share with other bacteria making them resistant to antibiotics
Bacteria External Structures: Glycocoalyx
- two different forms of the same thing
- Protective substance surrounding some bacteria
- Normally made of polysaccharides
- Presence/absence can be used for classification
Slime Layer
- Sticky and loose
- Prevents dehydration
- Allows bacteria to bind to surfaces
- Form a protective layer encapsulating colonies of bacteria
- Good at holding onto inorganic material
○ Prosthetics
○ Catheters
○ Replacements (hip, heart valve → must all come out) - Difficult to penetrate with antibiotics
Capsule
- Firmly attached to cell surface
- Specific to one bacteria
- Virulence factor that facilitates adherence and impairs phagocytosis
- Better at making us sick
○ With capsule → highly correlated with severe pneumonia
Endospores
- Defensive strategy against hostile or unfavorable environmental conditions
- Driven by nutrient supply
- Spores are not responsive to normal cleaning practices
- Metabolically dormant - resistant to heat, cold, drying, chemicals and radiation
- Germinate when conditions improve
- Excellent defensive strategy
What forms endospores
Formed by two genera: Clostridium spp. and Bacillus spp.
● Requires special environmental controls to kill spores
● Cleaning and disinfecting techniques are not sufficient
● Sterilization is required
○ Steam, under pressure, chemical sterilants, etc
What makes up the bacteria cell wall structure?
- peptidoglycan layer
- not observed in human body
- makes it easy to identify and get rid of it
t/f: different types of cell walls can be used to classify species
true
Bacteria Cell wall characteristics
● Provides cellular structure and shape
● Counters the effects of osmotic pressure
● Provides rigid platform for external appendages
○ Allows flagella, fimbriae to anchor
● Facilitates adherence to host cells & evasion of host defenses
● Target for antibiotics
Gram Stain identifies
two types of bacteria cell wall known as positive or negative
Gram positive
- bacteria retain primary dyes and become a purple colour post-Gram Stain
- Thick, dense, non-porous cell walls
- Do not possess an outer membrane
Gram Negative
- bacteria easily decolorized and take on a pink/red colour post-Gram Stain
- Thin cell wall surrounded by outer membrane
- The outer membrane contains Lipid A; polysaccharide
Lipid A
- is a pathogen associated molecular lipid protein
○ Component of foreign agent
○ Our body responds to it immunologically
○ Even though we don’t have any direct contact/history with pattern/protein
○ Every human is born with an immune system that recognizes Lipid A as foreign
Dye retention is dependent on
- thickness, density, porosity, integrity, and chemical composition of cell wall
- The Gram Stain is starting point for bacterial identification
Community is more associated with what type of gram
gram positive organism
● More frequently infected with gram positive