Rehyb HSQ 2500 Flashcards

1
Q

Which steps can be rehybed on HSQ 2500?

A
Read 1
Index 1 (if before PE turnaround)
Index 2 (SR FCs only- not possible on PE FC)
Read 2 (if after PE turnaround)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

When stopping a run on HSQ 2500, is a wash required?

A

Not if planning to rehyb right away

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

When restarting a rehybed FC on HSQ 2500, is priming required?

A

Only if a wash was performed

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is the process for priming reagents then starting a HO rehyb on HSQ 2500?

A
Click "Check"
Load a used wash FC
Pump positions 15 (FDR) and 19 (HT2)
Then choose "Rehyb Run"
Prime SBS reagents (wash FC)
Swap to clustered FC
Click "Start"
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Is a rehyb for V4 reagents on HSQ 2500 performed on cBot or onboard?

A

Onboard

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Which option is selected when rehybing V4 on HSQ 2500- “New Run”, “Resume Run” or “Rehyb run” ?

A

Rehyb run

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Is it possible to bypass a wash on HSQ 2500? Caveats?

A

Yes , however if other side is running must stop it first.
Stop- > Normal stop at end of lane/chemistry (Keep RTA as is).
After HCS is restarted for wash bypass, resume other run.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Is a rehyb for V3 read 1 on HSQ 2500 performed on cBot or onboard? What about read 2?

A

cBot- read 1

HSQ- read 2

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What is the process for manually priming reagents then starting a RR rehyb on HSQ 2500?

A
Click "Check"
Load a used wash FC
Pump positions 15 (FDR) once
Then pump all other SBS positiions twice
Then choose "Rehyb Run"
Swap to clustered FC
Click "Start"
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Which reagents must be replenished or replaced for onboard rehyb?

A

replenish USB
replenish SBS reagents if needed
replace FDR
replace primer being rehybed

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Are R2 rehyb reagents and primers for V3 HO provided in rehyb kit?

A

No, need to use parts of a full kit to perform R2 rehyb on V3.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

HSQ 2500 V3 rehyb steps for R2

A

Click Sequence> “resume run”
Choose PE turnaround, then Rehyb
Select Yes to reset RTA
(If instrument was washed, select Prime- Prime all SBS reagents with a wash FC)
Replace HP11 (R2 primer), HP3 (denat sol) and HT2
Click Start

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

If rehybing read 1 primer for V3 on cBot- when FC is moved to HSQ, which option? Start, resume, rehyb?

A

Start a new run

How well did you know this?
1
Not at all
2
3
4
5
Perfectly