proteins Flashcards
what is the monomer of proteins?
amino acids
general structure of proteins
- amine group on the left (H2N)
- R group joined to the alpha carbon
- carboxyl group on the right (COOH)
what is a condensation reaction for proteins?
- forms between the hydrogen in the amine group and the hydroxide in the carboxyl group
- when two amino acids join together to form a dipeptide
- or when two or more amino acids join together to form a polypeptide
- this makes a peptide bond form
- it also forms a water molecule
role of hydrogen bonds
contribute to the rigidity and maintain the shape
role of ionic bonds
creates electrostatic attractions, between positive and negatively charged ions
role of disulfide bridges
stabilises the 3d structure
primary structure of proteins
number and type of sequence ordered by amino acids
secondary structure of proteins
coiling: alpha helix
- left handed spiral
- held by hydrogen bonds between -NH and -CO
folding: b-pleated sheet
- held by hydrogen bonds
- polypeptide zigzags to form sheet of antiparallel strands
tertiary structure of proteins
- projects R group of amino acids
- determines folding and bonding
- 3d shape forms, active site formed
- can form hydrogen bonds, ionic bonds, disulfide bridges and cause hydrophobic interactions
quaternary structure of proteins
- two or more polypeptide chains in a tertiary form combine to make more complex structure
- joined together by the different bonds in the tertiary stage
what is a globular protein?
- enzymes, antibodies, hormones and plasma
- folded or spherical
- insoluable in water
- globular conjuated: contain a prosthetic group
what is a fibrous protein?
- have structural functions
- strong and tough
- long chains with many crosslinks
- alpha helices linked into strands
- held together by hydrogen bonds
examples: collagen and keratin
biuret test for proteins
- solution needs to be made alkane with sodium/potassium hydroxide
- add copper (II) sulphate (biurets regeant)
- colour should change blue to purple
- more purple more proteins in the sample
- must be two or more peptide bonds present, otherwise no colour change visible