EVOLUTION OF BIODIVERSITY Flashcards

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1
Q

Is biodiversity evenly distributed?

A

No, it varies across the tree of life, in space, and through time.

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2
Q

What methods are used to study diversification patterns?

A

Fossil data: Reveals long-term patterns but is coarse (families, not species) and incomplete.

Molecular phylogenies: Calibrated with fossil dates to infer diversification.

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3
Q

How do traits affect diversification?

A

Traits associated with diversification often haven’t evolved enough to clarify their role.

Testing requires independent replicates.

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4
Q

What is a sister clade comparison?

A

Compares clades sharing a common ancestor.

Focuses on differences that evolved after divergence.

Example: Herbivorous clades are often more species-rich than their sister clades.

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5
Q

Why is a large sample (N) needed?

A

To identify meaningful associations between traits and diversification rates.

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6
Q

What is the importance of dated phylogenies?

A

Enables plotting the number of lineages through time.

Observed surviving lineages (N) are usually fewer than the actual lineages.

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7
Q

What is co-speciation?

A

When two groups (e.g., host and parasite) speciate in tandem due to close ecological or evolutionary relationships.

One species’ divergence drives a corresponding split in the other.

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8
Q

Why does co-speciation occur?

A

Dependency: A species depends on another for survival.

When the host speciates, the dependent species is affected, leading to parallel diversification.

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9
Q

Examples of co-speciation:

A

Host-Parasite Systems: Lice diverging alongside bird species.

Plant-Pollinator Relationships: Specific fig trees and their wasp pollinators.

Symbiotic Relationships: Termites and their gut protozoa.

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10
Q

Evidence for co-speciation:

A

Mirror phylogenies: Similar branching patterns in associated lineages.

Genetic correlation: Parallel evolutionary patterns.

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11
Q

What is the diversification rate (D)?

A

D = S - E (Speciation rate - Extinction rate).

On a log scale:
Steeper slopes indicate higher diversification rates.

Pull of the present: Reflects the ratio S/E.

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12
Q

Expectation vs. observed lineages:

A

Expectation: Assumes all species in phylogeny are sampled, with constant speciation/extinction rates.

Observed: Often shows a slowdown in diversification due to limited niches.

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13
Q

What does a constant positive diversification rate imply?

A

Exponential growth in the number of species.

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14
Q

Do taxa diversify at the same rates?

A

No, taxa show high variation in diversification rates.

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15
Q

What is the evidence for clade-specific limits?

A

Many clades show:
Initial burst of diversification.
Later slowdown due to ecological limits.

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16
Q

How is species diversity reconstructed?

A

Using calibrated phylogenies over evolutionary timescales.

17
Q

What is phylogenetically independent contrast?

A

A method using sister clade pairs differing in a focal trait to test associations with diversification.

18
Q

What do congruent phylogenies indicate?

A

Extreme co-evolution (e.g., parasites and hosts) results in similar tree topologies.