3 Flashcards

1
Q

which fibrous proteins features alpha helices

A

alpha keratin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

which fibrous proteins feature beta sheets

A

fibroin and beta-keratin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

which fibrous proteins feature collagen helices

A

collagen

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

what are alpha keratins enriched for

A

alanine and cysteine

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

describe the chains in the dimer of an alpha keratin

A

two chains in a dimer are twisted into a left-handed coiled coil superhelix

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

describe the structure of collagen (4)

A

three residues per time
interchain H-bonds
3 chains assemble into a right-handed super helix
left handed

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

what is the primary structure of collagen composed of

A

glycine-proline- hydroxyproline

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

what are collagen chains rich in

A

glycine, proline, 4-hydroxyproline, 5-hydroxylysine

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

where does the hydrogen bonding occur in collagen triple helices

A

between not within

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what does synthesis of 4-hydroxyproline require

A

vitamin c

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

how does cross-linking occur in collagen helices

A

lysine, hydroxylysine, histidine

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what are similarities between soluble globular proteins (4)

A

mixture of secondary (regular and irregular)
hydophobic core
closely packed interiors
max H-bonds in interior

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what are differences between soluble globular proteins (3)

A

secondary strucuture composition
prosthetic groups
disulfides

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what are the rules for soluble globular proteins (4)

A

2 layers to bury the hydrophobic interior
within secondary not between
no knots
close in primary = close in tertiary
right-handed connections between beta parallel

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what are the 3 classifcation systems

A

SCOPE Pfam CATH`

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

which motifs create two layers of secondary strucute

A

beta-alpha-beta
alpha-alpha

17
Q

motif/fold vs domains

A

recognizable combination of secondary
discrete independently folded units within a polypeptide

18
Q

describe a leucine zipper

A

coiled-coil with 2 alpha helices (left-handed)